RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 CD8BP10966 210 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 GCAP28676 217 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ETV4P43268 484 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 TMEM33P57088 247 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CLRN1P58418 232 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SNRPEP62304 92 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 FLI1Q01543 452 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PON3Q15166 354 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 TMEM200BQ69YZ2 307 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OR52E8Q6IFG1 317 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PRR27Q6MZM9 219 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SPNS3Q6ZMD2 512 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 RANBP3LQ86VV4 465 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ERI1Q8IV48 349 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 WDFY1Q8IWB7 410 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 FAM109AQ8N4B1 249 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 FITM2Q8N6M3 262 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SYT14Q8NB59 555 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OR7G2Q8NG99 324 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OR4D5Q8NGN0 318 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OR1J2Q8NGS2 313 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 C22orf15Q8WYQ4 148 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PEX11GQ96HA9 241 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SLC52A3Q9NQ40 469 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PLEKHJ1Q9NW61 149 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 GNG12Q9UBI6 72 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OPTCQ9UBM4 332 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CSAG2Q9Y5P2 127 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 AUP1Q9Y679 476 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CFAP47Q6ZTR5 3102 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 LRP5LA4QPB2 252 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF729A6NN14 1252 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CYSRT1A8MQ03 144 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SULT1C2O00338 296 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PLPP1O14494 284 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 UTS2O95399 124 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CLDN9O95484 217 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CLDN14O95500 239 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 GABRA1P14867 456 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 IL1RNP18510 177 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 IMPDH1P20839 514 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 HTR2CP28335 458 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SRD5A2P31213 254 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CEACAM8P31997 349 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 DUTP33316 252 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 TIMP3P35625 211 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SERPINB5P36952 375 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PLA2G16P53816 162 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 FGF8P55075 233 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ARF6P62330 175 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 EWSR1Q01844 656 aaKnown RBP eCLIP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 DAZAP2Q15038 168 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 EIF2S3LQ2VIR3 472 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 NDUFAF6Q330K2 333 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SLC25A35Q3KQZ1 300 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CD300EQ496F6 205 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 DEFB134Q4QY38 66 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 METTL21CQ5VZV1 264 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 AHSA2Q719I0 299 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 GPR141Q7Z602 305 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 GSPT2Q8IYD1 628 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 RIBC1Q8N443 379 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 DTWD1Q8N5C7 304 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 PAPD5Q8NDF8 572 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 RNASEH2CQ8TDP1 164 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ASB10Q8WXI3 467 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 TSLPQ969D9 159 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CPNE4Q96A23 557 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 S100PBPQ96BU1 408 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 C8orf44Q96CB5 159 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 MBD6Q96DN6 1003 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 LGALS12Q96DT0 336 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF681Q96N22 645 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SLITRK2Q9H156 845 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OR51B5Q9H339 312 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 IKZF5Q9H5V7 419 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 L2HGDHQ9H9P8 463 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SEBOXQ9HB31 216 aaPredicted RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 TRIM36Q9NQ86 728 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 DCAF13Q9NV06 445 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 C1orf123Q9NWV4 160 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 USE1Q9NZ43 259 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 CISD1Q9NZ45 108 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 OPN4Q9UHM6 478 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 FAM32AQ9Y421 112 aaKnown RBP4.63□□□□□ -1.67
CCDC39-205ENST00000485055 ZNF175Q9Y473 711 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 WDR45Q9Y484 360 aa4.63□□□□□ -1.67
CCDC39-205ENST00000485055 SPTBP11277 2137 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 E5RGE8 158 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 PSMD12O00232 456 aaPredicted RBP4.62□□□□□ -1.67
CCDC39-205ENST00000485055 FBP2O00757 339 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 CCNKO75909 580 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 SNAP29O95721 258 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 CRHP06850 196 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 XKP51811 444 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 CORO7P57737 925 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 BTN3A2P78410 334 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 BTG2P78543 158 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 FOXL1Q12952 345 aa4.62□□□□□ -1.67
CCDC39-205ENST00000485055 GTF2H2Q13888 395 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms