RNA–Protein interactions for RNA: ENST00000484841.5

ACTB-212, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,032 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-212ENST00000484841 NMNAT3Q96T66 252 aa16.96■□□□□ 0.31
ACTB-212ENST00000484841 MYLK2Q9H1R3 596 aa16.96■□□□□ 0.31
ACTB-212ENST00000484841 RPRD1BQ9NQG5 326 aaKnown RBP16.96■□□□□ 0.31
ACTB-212ENST00000484841 LRCH1Q9Y2L9 728 aa16.96■□□□□ 0.31
ACTB-212ENST00000484841 PPIAL4AQ9Y536 164 aa16.96■□□□□ 0.31
ACTB-212ENST00000484841 LHFPL6Q9Y693 200 aa16.96■□□□□ 0.31
ACTB-212ENST00000484841 F5H5K5 113 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 ARPC3O15145 178 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 FABP3P05413 133 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 ZNF12P17014 697 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 GNB2P62879 340 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 COX10Q12887 443 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 HNRNPA0Q13151 305 aaKnown RBP16.95■□□□□ 0.3
ACTB-212ENST00000484841 BTNL3Q6UXE8 466 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 DEFB108BQ8NET1 73 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 ZNF420Q8TAQ5 688 aaPredicted RBP16.95■□□□□ 0.3
ACTB-212ENST00000484841 GNPDA2Q8TDQ7 276 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 SIGLEC11Q96RL6 698 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 SSBP3Q9BWW4 388 aaPredicted RBP16.95■□□□□ 0.3
ACTB-212ENST00000484841 PLA2G12AQ9BZM1 189 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 MIOXQ9UGB7 285 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 POLR3KQ9Y2Y1 108 aaPredicted RBP16.95■□□□□ 0.3
ACTB-212ENST00000484841 INSIG2Q9Y5U4 225 aa16.95■□□□□ 0.3
ACTB-212ENST00000484841 CEACAM18A8MTB9 384 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 A8MXK9 166 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 IQCF6A8MYZ5 107 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 TRAPPC2LH3BP13 241 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 DCTN6O00399 190 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 IDH3BO43837 385 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 ZNF823P16415 610 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 FPR3P25089 353 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 RAD23AP54725 363 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 SEC61A1P61619 476 aaKnown RBP16.94■□□□□ 0.3
ACTB-212ENST00000484841 HIST1H3AP68431 136 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 SAMD4BQ5PRF9 694 aaKnown RBP16.94■□□□□ 0.3
ACTB-212ENST00000484841 HIST2H3PS2Q5TEC6 136 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 HIST2H3AQ71DI3 136 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 NLRC3Q7RTR2 1065 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 MOGAT3Q86VF5 341 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 LINC00346Q8IVM7 164 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 OR6V1Q8N148 313 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 OR52L1Q8NGH7 329 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 ATF6BQ99941 703 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 SLC30A2Q9BRI3 323 aa16.94■□□□□ 0.3
ACTB-212ENST00000484841 MS4A7Q9GZW8 240 aaPredicted RBP16.94■□□□□ 0.3
ACTB-212ENST00000484841 IGLV1-36A0A0B4J1U3 117 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 CYB5R3P00387 301 aaPredicted RBP16.93■□□□□ 0.3
ACTB-212ENST00000484841 FSHBP01225 129 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 LCATP04180 440 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 HSD17B1P14061 328 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 HIST1H1CP16403 213 aaKnown RBP16.93■□□□□ 0.3
ACTB-212ENST00000484841 RRM2P31350 389 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 RBMXP38159 391 aaKnown RBP16.93■□□□□ 0.3
ACTB-212ENST00000484841 TPTEP56180 551 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 UBA52P62987 128 aaKnown RBP16.93■□□□□ 0.3
ACTB-212ENST00000484841 MXRA7P84157 204 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 SIGLECL1Q8N7X8 197 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 ZDHHC22Q8N966 263 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 SDR9C7Q8NEX9 313 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 SLC26A10Q8NG04 563 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 OR52E2Q8NGJ4 325 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 OR11L1Q8NGX0 322 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 SGMS2Q8NHU3 365 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 WDR76Q9H967 626 aa16.93■□□□□ 0.3
ACTB-212ENST00000484841 ZMAT3Q9HA38 289 aaKnown RBP16.93■□□□□ 0.3
ACTB-212ENST00000484841 F5H0A9 414 aaPredicted RBP16.92■□□□□ 0.3
ACTB-212ENST00000484841 F5H5P2 479 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 H0YL77 283 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 ZNF205O95201 554 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 WNT2P09544 360 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 FOXL1Q12952 345 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 SLC18B1Q6NT16 456 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 RPL13AP3Q6NVV1 102 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 LRRN1Q6UXK5 716 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 CFAP77Q6ZQR2 320 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 PGAP1Q75T13 922 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 MRPL21Q7Z2W9 205 aaKnown RBP16.92■□□□□ 0.3
ACTB-212ENST00000484841 PGAM4Q8N0Y7 254 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 OR8B3Q8NGG8 313 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 SPRYD4Q8WW59 207 aaPredicted RBP16.92■□□□□ 0.3
ACTB-212ENST00000484841 DVL3Q92997 716 aaPredicted RBP16.92■□□□□ 0.3
ACTB-212ENST00000484841 SPTSSAQ969W0 71 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 NEIL1Q96FI4 390 aaPredicted RBP16.92■□□□□ 0.3
ACTB-212ENST00000484841 OR8B2Q96RD0 313 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 FUZQ9BT04 418 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 C1QTNF5Q9BXJ0 243 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 NDE1Q9NXR1 346 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 ZNF69Q9UC07 566 aa16.92■□□□□ 0.3
ACTB-212ENST00000484841 NOP16Q9Y3C1 178 aaKnown RBP16.92■□□□□ 0.3
ACTB-212ENST00000484841 IGHV3-64DA0A0J9YX35 117 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 ACSM4P0C7M7 580 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.91■□□□□ 0.3
ACTB-212ENST00000484841 TRAP1Q12931 704 aaKnown RBP16.91■□□□□ 0.3
ACTB-212ENST00000484841 TSPAN31Q12999 210 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 BAMBIQ13145 260 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 ZNF181Q2M3W8 571 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 AWAT1Q58HT5 328 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 C16orf89Q6UX73 402 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 ZBTB46Q86UZ6 589 aa16.91■□□□□ 0.3
ACTB-212ENST00000484841 KLBQ86Z14 1044 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms