RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 DRAM2Q6UX65 266 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 DPY19L4Q7Z388 723 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 ERI1Q8IV48 349 aaKnown RBP13.58□□□□□ -0.24
UPF3A-208ENST00000484246 OR5L1Q8NGL2 311 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 OR6N2Q8NGY6 317 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 OTOSQ8NHW6 89 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 C10orf105Q8TEF2 133 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 SNX33Q8WV41 574 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 SPTSSAQ969W0 71 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 OTULINQ96BN8 352 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 SLAMF6Q96DU3 332 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 ZNF799Q96GE5 643 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 C18orf12Q96KH6 178 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 TOR3AQ9H497 397 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 RIBC2Q9H4K1 309 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 STARD10Q9Y365 291 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 ARID1AO14497 2285 aa13.58□□□□□ -0.24
UPF3A-208ENST00000484246 ZFHX3Q15911 3703 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 ITPR3Q14573 2671 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 HEATR1Q9H583 2144 aaKnown RBP13.57□□□□□ -0.24
UPF3A-208ENST00000484246 A0A096LNT2 108 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 SLC22A31A6NKX4 558 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 SLC25A16P16260 332 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 GRB2P62993 217 aaKnown RBP13.57□□□□□ -0.24
UPF3A-208ENST00000484246 PSG7Q13046 419 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 APOFQ13790 326 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 KLHL12Q53G59 568 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 ZMAT1Q5H9K5 638 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 FAM209AQ5JX71 171 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 TMEM154Q6P9G4 183 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 GID4Q8IVV7 300 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 ZNF525Q8N782 197 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 TCEANCQ8N8B7 351 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 OR8J1Q8NGP2 316 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 HAVCR1Q96D42 359 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 HRASLS5Q96KN8 279 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 TEAD3Q99594 435 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 KCNJ15Q99712 375 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 ABHD6Q9BV23 337 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 YIPF3Q9GZM5 350 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 POFUT1Q9H488 388 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 HAO2Q9NYQ3 351 aa13.57□□□□□ -0.24
UPF3A-208ENST00000484246 CELSR1Q9NYQ6 3014 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 IGHV4-30-2A0A087WSY4 118 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 LOC390937A0A1W2PQ73 354 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 F5H5K5 113 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 H7C1Q1 480 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 TLX2O43763 284 aaPredicted RBP13.56□□□□□ -0.24
UPF3A-208ENST00000484246 SELENOFO60613 162 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 OPRL1P41146 370 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 SLC15A1P46059 708 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 PDLIM4P50479 330 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 EIF2B1Q14232 305 aaKnown RBP13.56□□□□□ -0.24
UPF3A-208ENST00000484246 SLC16A9Q7RTY1 509 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 ZCCHC24Q8N2G6 241 aaKnown RBP13.56□□□□□ -0.24
UPF3A-208ENST00000484246 ZNF786Q8N393 782 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 TRUB1Q8WWH5 349 aaKnown RBP13.56□□□□□ -0.24
UPF3A-208ENST00000484246 FAM168AQ92567 244 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 RDH12Q96NR8 316 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 RHNO1Q9BSD3 238 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 COPS4Q9BT78 406 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 TPK1Q9H3S4 243 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 C8orf4Q9NR00 106 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 PURGQ9UJV8 347 aaKnown RBP13.56□□□□□ -0.24
UPF3A-208ENST00000484246 ARFGEF3Q5TH69 2177 aa13.56□□□□□ -0.24
UPF3A-208ENST00000484246 A0A1B0GWJ7 208 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 ZSCAN5BA6NJL1 495 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 VWC2LB2RUY7 222 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 M0R129 80 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 LY6HO94772 140 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 APOC1P02654 83 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 LYNP07948 512 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 CD55P08174 381 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 INHBBP09529 407 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 NAT2P11245 290 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 ALOX5APP20292 161 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 GIFP27352 417 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 CDC42P60953 191 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 RPS7P62081 194 aaKnown RBP13.55□□□□□ -0.24
UPF3A-208ENST00000484246 TMED1Q13445 227 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 SLC25A30Q5SVS4 291 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 ZBTB49Q6ZSB9 765 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 MEPCEQ7L2J0 689 aaKnown RBP13.55□□□□□ -0.24
UPF3A-208ENST00000484246 CIARTQ8N365 385 aaPredicted RBP13.55□□□□□ -0.24
UPF3A-208ENST00000484246 DIRC2Q96SL1 478 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 MBOAT4Q96T53 435 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 AMELYQ99218 206 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 MNTQ99583 582 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 OPA3Q9H6K4 179 aa13.55□□□□□ -0.24
UPF3A-208ENST00000484246 PLSCR5A0PG75 271 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 NCR1O76036 304 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 DAOP14920 347 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 NAA10P41227 235 aaPredicted RBP13.54□□□□□ -0.24
UPF3A-208ENST00000484246 ZNF81P51508 661 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 DEGS2Q6QHC5 323 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 PRSS45Q7RTY3 260 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 BIVMQ86UB2 503 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 UBASH3BQ8TF42 649 aa13.54□□□□□ -0.24
UPF3A-208ENST00000484246 EME1Q96AY2 570 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms