RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 PHYHO14832 338 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 FADS2O95864 444 aaKnown RBP15.36■□□□□ 0.05
CPNE1-224ENST00000483359 LCATP04180 440 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 FABP6P51161 128 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 ACTC1P68032 377 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 ACTA1P68133 377 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 ZNF85Q03923 595 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 MSMPQ1L6U9 139 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 KRTAP27-1Q3LI81 207 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 ARL9Q6T311 187 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 TMEM171Q8WVE6 324 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 ASB17Q8WXJ9 295 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 OR8B4Q96RC9 309 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 MNTQ99583 582 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 DOK1Q99704 481 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 POFUT1Q9H488 388 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 ELOVL3Q9HB03 270 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 AKAP6Q13023 2319 aa15.36■□□□□ 0.05
CPNE1-224ENST00000483359 J3QRE1 110 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 ANXA2P07355 339 aaKnown RBP15.35■□□□□ 0.05
CPNE1-224ENST00000483359 OR4A8P0C604 315 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 PCSK6P29122 969 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 OTX1P32242 354 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-224ENST00000483359 RGS7BPQ6MZT1 257 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-224ENST00000483359 AHSA2Q719I0 299 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 SNX33Q8WV41 574 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 DHRS9Q9BPW9 319 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 BCL2L14Q9BZR8 327 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 OR2J1Q9GZK6 312 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 LAMP3Q9UQV4 416 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 RAI1Q7Z5J4 1906 aaPredicted RBP15.35■□□□□ 0.05
CPNE1-224ENST00000483359 CSMD1Q96PZ7 3565 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 SLC1A7O00341 560 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 ADRA2AP08913 450 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 GLRXP35754 106 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 PRSS12P56730 875 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 PPP1CBP62140 327 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 ADIPOQQ15848 244 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 SNAI3Q3KNW1 292 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 KLHL22Q53GT1 634 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 C6orf141Q5SZD1 244 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 LHFPL3Q86UP9 236 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 ZNF679Q8IYX0 411 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 MUC15Q8N387 334 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 ACBD7Q8N6N7 88 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 SLC25A40Q8TBP6 338 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 GGHQ92820 318 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 DCLRE1CQ96SD1 692 aaKnown RBP15.35■□□□□ 0.05
CPNE1-224ENST00000483359 SYT3Q9BQG1 590 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 Q9H521 79 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 MRM2Q9UI43 246 aaKnown RBP15.35■□□□□ 0.05
CPNE1-224ENST00000483359 STARD10Q9Y365 291 aa15.35■□□□□ 0.05
CPNE1-224ENST00000483359 CACNA1DQ01668 2161 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 C5orf63A6NC05 138 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 SOD3P08294 240 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 TTKP33981 857 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 ZNF121P58317 390 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-224ENST00000483359 RPS23P62266 143 aaKnown RBP15.34■□□□□ 0.05
CPNE1-224ENST00000483359 ROM1Q03395 351 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 MVKQ03426 396 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 EGR3Q06889 387 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 TP53I3Q53FA7 332 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 DRAM2Q6UX65 266 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 LRP11Q86VZ4 500 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 ZNF442Q9H7R0 627 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 TBCCD1Q9NVR7 557 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 PTTG3PQ9NZH4 202 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 DUSP13Q9UII6 198 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 GNG8Q9UK08 70 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 PCDHGB1Q9Y5G3 927 aa15.34■□□□□ 0.05
CPNE1-224ENST00000483359 POLQO75417 2590 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 TBX1O43435 398 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 ICMTO60725 284 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 RPP14O95059 124 aaKnown RBP15.33■□□□□ 0.05
CPNE1-224ENST00000483359 KRT8P05787 483 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 APOBEC3AP31941 199 aaPredicted RBP15.33■□□□□ 0.05
CPNE1-224ENST00000483359 RGS6P49758 472 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 RIDAP52758 137 aaKnown RBP15.33■□□□□ 0.05
CPNE1-224ENST00000483359 GFOD2Q3B7J2 385 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 UNQ6126/PRO20091Q6UXV3 157 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 FAM57BQ71RH2 274 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 RHOUQ7L0Q8 258 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 FBXL14Q8N1E6 418 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 ZNF611Q8N823 705 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 YIPF7Q8N8F6 280 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 ZNF540Q8NDQ6 660 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 APOBEC3DQ96AK3 386 aaPredicted RBP15.33■□□□□ 0.05
CPNE1-224ENST00000483359 ALG8Q9BVK2 526 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 C1QTNF5Q9BXJ0 243 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 MRPL37Q9BZE1 423 aaKnown RBP15.33■□□□□ 0.05
CPNE1-224ENST00000483359 MRPS18AQ9NVS2 196 aaKnown RBP15.33■□□□□ 0.05
CPNE1-224ENST00000483359 GTF2A1LQ9UNN4 478 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 CMAHPQ9Y471 501 aa15.33■□□□□ 0.05
CPNE1-224ENST00000483359 CLPTM1O96005 669 aa15.33■□□□□ 0.04
CPNE1-224ENST00000483359 IGHA1P01876 353 aa15.33■□□□□ 0.04
CPNE1-224ENST00000483359 SERPINF1P36955 418 aa15.33■□□□□ 0.04
CPNE1-224ENST00000483359 MPV17P39210 176 aa15.33■□□□□ 0.04
CPNE1-224ENST00000483359 PSMA6P60900 246 aaKnown RBP15.33■□□□□ 0.04
CPNE1-224ENST00000483359 HLXQ14774 488 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-224ENST00000483359 ZNF544Q6NX49 715 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms