RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 RPL35AP18077 110 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 GPD1P21695 349 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 KIR3DL2P43630 455 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 CX3CR1P49238 355 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ZNF154Q13106 437 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 UAP1Q16222 522 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 SIRPB2Q5JXA9 342 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 LCLAT1Q6UWP7 414 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 Q6ZT83 130 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 OR2W3Q7Z3T1 314 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 PRR22Q8IZ63 422 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 BLOC1S5Q8TDH9 187 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 IL12RB2Q99665 862 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 BCL2L14Q9BZR8 327 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 NAT10Q9H0A0 1025 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 SLC39A1Q9NY26 324 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 NKIRAS1Q9NYS0 192 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ING1Q9UK53 422 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 EIF3LQ9Y262 564 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 OR51B4Q9Y5P0 310 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 CPQQ9Y646 472 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ASXL3Q9C0F0 2248 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 RYR3Q15413 4870 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 DNAH2Q9P225 4427 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 LINC01548A6NM66 108 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 PLPP1O14494 284 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 NDUFAB1O14561 156 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 FGF16O43320 207 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ATP8B1O43520 1251 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 GAGE7O76087 117 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 GLUD1P00367 558 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 CATP04040 527 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 SERPINA5P05154 406 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 GAGE12FP0CL80 117 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 GAGE12GP0CL81 117 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 GAGE12IP0CL82 117 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 HSMCR30P0CW71 290 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 MAGEA3P43357 314 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 RFX2P48378 723 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 OSTNP61366 133 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 GAGE1Q13065 139 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 GAGE4Q13068 117 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ABRAXAS2Q15018 415 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 TRIM16LQ309B1 348 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 FAHD2BQ6P2I3 314 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 GCNT7Q6ZNI0 430 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ZNF547Q8IVP9 402 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 AENQ8WTP8 325 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 FLYWCH2Q96CP2 140 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 CCDC124Q96CT7 223 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 OMA1Q96E52 524 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 YIPF6Q96EC8 236 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 FAHD2AQ96GK7 314 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 PRAC1Q96KF2 57 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 JSRP1Q96MG2 331 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 PANK2Q9BZ23 570 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 THUMPD1Q9NXG2 353 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 THAP10Q9P2Z0 257 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 PLLPQ9Y342 182 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 AUP1Q9Y679 476 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ZNF462Q96JM2 2506 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 SHANK1Q9Y566 2161 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 A0A0A6YYD5 115 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 CLDN34H7C241 214 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 TNFAIP8O95379 198 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 IGHV4-34P06331 123 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 PRSS56P0CW18 603 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 FGF9P31371 208 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 TGM4P49221 684 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 VLDLRP98155 873 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 POU3F1Q03052 451 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 RBBP4Q09028 425 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 DLG1Q12959 904 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ZNHIT3Q15649 155 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 ZNF324BQ6AW86 544 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 HS3ST5Q8IZT8 346 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 BLIDQ8IZY5 108 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 DHRSXQ8N5I4 330 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 TMEM161BQ8NDZ6 487 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 OR56B4Q8NH76 319 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 OR5K2Q8NHB8 316 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 CCDC26Q8TAB7 109 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 SLC7A13Q8TCU3 470 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 CCDC126Q96EE4 140 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ZNF486Q96H40 463 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 NOL4LQ96MY1 436 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 DUSP26Q9BV47 211 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 APOBEC3BQ9UH17 382 aaKnown RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 KLK13Q9UKR3 277 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 ELF5Q9UKW6 265 aaPredicted RBP2.69□□□□□ -1.98
SMC6-208ENST00000481708 BAHCC1Q9P281 2608 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 FREM2Q5SZK8 3169 aa2.69□□□□□ -1.98
SMC6-208ENST00000481708 CNOT1A5YKK6 2376 aaKnown RBP2.68□□□□□ -1.98
SMC6-208ENST00000481708 CFLARO15519 480 aa2.68□□□□□ -1.98
SMC6-208ENST00000481708 AHSA1O95433 338 aa2.68□□□□□ -1.98
SMC6-208ENST00000481708 ACSM4P0C7M7 580 aa2.68□□□□□ -1.98
SMC6-208ENST00000481708 BCKDHAP12694 445 aa2.68□□□□□ -1.98
SMC6-208ENST00000481708 PDHA2P29803 388 aa2.68□□□□□ -1.98
SMC6-208ENST00000481708 SLC1A1P43005 524 aa2.68□□□□□ -1.98
SMC6-208ENST00000481708 PEX3P56589 373 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms