RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 IFT27Q9BW83 186 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 OR52D1Q9H346 318 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 WDR76Q9H967 626 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 NTN4Q9HB63 628 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 GCM1Q9NP62 436 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
LIMS3-203ENST00000480744 OR5V1Q9UGF6 321 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 B9D1Q9UPM9 204 aa12.82□□□□□ -0.36
LIMS3-203ENST00000480744 IGLV1-36A0A0B4J1U3 117 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 CEACAM18A8MTB9 384 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 F5H0A9 414 aaPredicted RBP12.81□□□□□ -0.36
LIMS3-203ENST00000480744 H0YL77 283 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 GADD45GO95257 159 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 CYB5R3P00387 301 aaPredicted RBP12.81□□□□□ -0.36
LIMS3-203ENST00000480744 ZNF12P17014 697 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 SRP9P49458 86 aaKnown RBP12.81□□□□□ -0.36
LIMS3-203ENST00000480744 PRSS12P56730 875 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 SMIM11AP58511 58 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 UBA52P62987 128 aaKnown RBP12.81□□□□□ -0.36
LIMS3-203ENST00000480744 MOGAT3Q86VF5 341 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 OR4K13Q8NH42 304 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 DVL3Q92997 716 aaPredicted RBP12.81□□□□□ -0.36
LIMS3-203ENST00000480744 ZMYND19Q96E35 227 aaPredicted RBP12.81□□□□□ -0.36
LIMS3-203ENST00000480744 DHRS1Q96LJ7 313 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 FN3KQ9H479 309 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 RPRD1BQ9NQG5 326 aaKnown RBP12.81□□□□□ -0.36
LIMS3-203ENST00000480744 ZNF69Q9UC07 566 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 NUP50Q9UKX7 468 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 INSIG2Q9Y5U4 225 aa12.81□□□□□ -0.36
LIMS3-203ENST00000480744 F5H5P2 479 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 IFNL4K9M1U5 179 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 OR10H3O60404 316 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 HLA-DQA2P01906 255 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 RPS2P15880 293 aaKnown RBP12.8□□□□□ -0.36
LIMS3-203ENST00000480744 HIST1H1CP16403 213 aaKnown RBP12.8□□□□□ -0.36
LIMS3-203ENST00000480744 NOS3P29474 1203 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 HIST1H3AP68431 136 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 COX10Q12887 443 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 RFX4Q33E94 735 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 HIST2H3PS2Q5TEC6 136 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 HIST2H3AQ71DI3 136 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 PGAM4Q8N0Y7 254 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 OR6V1Q8N148 313 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 OR2AJ1Q8NGZ0 328 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 PYURFQ96I23 114 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 PITX2Q99697 317 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 FUZQ9BT04 418 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 CDADC1Q9BWV3 514 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 HCAR1Q9BXC0 346 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
LIMS3-203ENST00000480744 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
LIMS3-203ENST00000480744 A8MXK9 166 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 F5H5K5 113 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 MLNRO43193 412 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 HLA-DPB1P04440 258 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 MSX2P35548 267 aaPredicted RBP12.79□□□□□ -0.36
LIMS3-203ENST00000480744 SLC36A3Q495N2 470 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 AWAT1Q58HT5 328 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 KLF17Q5JT82 389 aaPredicted RBP12.79□□□□□ -0.36
LIMS3-203ENST00000480744 CFAP77Q6ZQR2 320 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 DEFB107AQ8IZN7 70 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 BCL6BQ8N143 479 aaPredicted RBP12.79□□□□□ -0.36
LIMS3-203ENST00000480744 SDR9C7Q8NEX9 313 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 SLC26A10Q8NG04 563 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 SLC30A2Q9BRI3 323 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 SSBP3Q9BWW4 388 aaPredicted RBP12.79□□□□□ -0.36
LIMS3-203ENST00000480744 C1QTNF5Q9BXJ0 243 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 GORASP2Q9H8Y8 452 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 TMEM100Q9NV29 134 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 CD300AQ9UGN4 299 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 MAGEL2Q9UJ55 1249 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 TMCC3Q9ULS5 477 aa12.79□□□□□ -0.36
LIMS3-203ENST00000480744 IGHV3OR16-10A0A075B7F0 116 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 LRRC30A6NM36 301 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 IQCF6A8MYZ5 107 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 ARPC3O15145 178 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 SPRY1O43609 319 aaPredicted RBP12.78□□□□□ -0.36
LIMS3-203ENST00000480744 LCATP04180 440 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 SEMG1P04279 462 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 FABP3P05413 133 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 WNT2P09544 360 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 ACSM4P0C7M7 580 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 SELEP16581 610 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 FPR3P25089 353 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 RRM2P31350 389 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 IFNGR2P38484 337 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 GNB2P62879 340 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 SLC35F1Q5T1Q4 408 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 SLC18B1Q6NT16 456 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 DOK3Q7L591 496 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 KLBQ86Z14 1044 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 NSL1Q96IY1 281 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 NSMCE2Q96MF7 247 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 ATF6BQ99941 703 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 MS4A7Q9GZW8 240 aaPredicted RBP12.78□□□□□ -0.36
LIMS3-203ENST00000480744 TMEM165Q9HC07 324 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 MIOXQ9UGB7 285 aa12.78□□□□□ -0.36
LIMS3-203ENST00000480744 OR6C68A6NDL8 312 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms