RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 ERVK13-1Q9NX77 482 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 LRCH1Q9Y2L9 728 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 EXOSC1Q9Y3B2 195 aaKnown RBP9.68□□□□□ -0.86
CLDN11-205ENST00000480067 LRP12Q9Y561 859 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 N6AMT1Q9Y5N5 214 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 ATP23Q9Y6H3 246 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 PKDREJQ9NTG1 2253 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 HECTD1Q9ULT8 2610 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 PTPN13Q12923 2485 aa9.68□□□□□ -0.86
CLDN11-205ENST00000480067 VSTM5A8MXK1 200 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 PRR32B1ATL7 298 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 CTAG2O75638 210 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 LCATP04180 440 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 CDK1P06493 297 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ACSM4P0C7M7 580 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 FAM157BP0CG42 384 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 NR4A1P22736 598 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 C21orf33P30042 268 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 CX3CR1P49238 355 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 RGS6P49758 472 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ETV1P50549 477 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 SLC35A2P78381 396 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 MVKQ03426 396 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 KRTAP27-1Q3LI81 207 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 TMPRSS11AQ6ZMR5 421 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 FAM220AQ7Z4H9 259 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 NAA40Q86UY6 237 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 YIPF7Q8N8F6 280 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ABHD4Q8TB40 342 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 TMEM204Q9BSN7 226 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 JAM3Q9BX67 310 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 CCDC90BQ9GZT6 254 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 OR51B6Q9H340 312 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 DUSP21Q9H596 190 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 SP140LQ9H930 580 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 FKBP14Q9NWM8 211 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 MRM2Q9UI43 246 aaKnown RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 GNG8Q9UK08 70 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 TMEM269A0A1B0GVZ9 245 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 SHISA9B4DS77 424 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 J3QLW9 94 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 RGS10O43665 173 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 LCKP06239 509 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ANXA2P07355 339 aaKnown RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 LIMS3P0CW19 117 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 LIMS4P0CW20 117 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF19P17023 458 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 LOXP28300 417 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 OTX1P32242 354 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 DCTDP32321 178 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 WNT5AP41221 380 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 OR12D2P58182 307 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 HGFACQ04756 655 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 CDONQ4KMG0 1287 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 TP53I3Q53FA7 332 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF684Q5T5D7 378 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 LIPNQ5VXI9 398 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 VHLLQ6RSH7 139 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF704Q6ZNC4 412 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 EGFL6Q8IUX8 553 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 C1orf174Q8IYL3 243 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF101Q8IZC7 436 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 KBTBD8Q8NFY9 601 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 OR5L1Q8NGL2 311 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 APOBEC3DQ96AK3 386 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 C4orf36Q96KX1 117 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 COG8Q96MW5 612 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 DOK1Q99704 481 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 BCL2L14Q9BZR8 327 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 CLEC4MQ9H2X3 399 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 BRD7Q9NPI1 651 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 CA10Q9NS85 328 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 TBCCD1Q9NVR7 557 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 PAK1IP1Q9NWT1 392 aaPredicted RBP9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ERVK-18Q9QC07 812 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 ERGIC3Q9Y282 383 aa9.67□□□□□ -0.86
CLDN11-205ENST00000480067 RTTNQ86VV8 2226 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 ABCA4P78363 2273 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 CADP27708 2225 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 FAM221AA4D161 298 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 ICMTO60725 284 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 SMPD2O60906 423 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 RPP14O95059 124 aaKnown RBP9.66□□□□□ -0.86
CLDN11-205ENST00000480067 PLAUP00749 431 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 NGFP01138 241 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 SLC2A1P11166 492 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 MMP16P51512 607 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF121P58317 390 aaPredicted RBP9.66□□□□□ -0.86
CLDN11-205ENST00000480067 RPS23P62266 143 aaKnown RBP9.66□□□□□ -0.86
CLDN11-205ENST00000480067 TLE4Q04727 773 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 SNTB2Q13425 540 aaKnown RBP9.66□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF829Q3KNS6 432 aaPredicted RBP9.66□□□□□ -0.86
CLDN11-205ENST00000480067 ZNF672Q499Z4 452 aaPredicted RBP9.66□□□□□ -0.86
CLDN11-205ENST00000480067 TMEM200AQ86VY9 491 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 SYS1Q8N2H4 156 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 KLHL36Q8N4N3 616 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 NUP37Q8NFH4 326 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 OR52H1Q8NGJ2 320 aa9.66□□□□□ -0.86
CLDN11-205ENST00000480067 OR1J1Q8NGS3 322 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms