RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 LHFPL6Q9Y693 200 aa5.61□□□□□ -1.51
FN1-220ENST00000480024 TRAV40A0A0B4J280 105 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 F5H5K5 113 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 J3QW42 95 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 MLNRO43193 412 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 GMNNO75496 209 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 GADD45GO95257 159 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 RENP00797 406 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 HLA-DQA2P01906 255 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 HLA-DPB1P04440 258 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 IGHV4-38-2P0DP08 117 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 HIST1H1CP16403 213 aaKnown RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 EGR1P18146 543 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 NOS3P29474 1203 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 CRABP1P29762 137 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 SLC6A6P31641 620 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 MDH1P40925 334 aaKnown RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 SRP9P49458 86 aaKnown RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 GNB2P62879 340 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 COX10Q12887 443 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 KCNMB1Q16558 191 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 FAM201AQ5SY85 155 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 SLC27A4Q6P1M0 643 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 PGM2L1Q6PCE3 622 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 DOK3Q7L591 496 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 KLBQ86Z14 1044 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 OR6V1Q8N148 313 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 PARP8Q8N3A8 854 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 C19orf18Q8NEA5 215 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 SDR9C7Q8NEX9 313 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 GJC3Q8NFK1 279 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 SLC26A10Q8NG04 563 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 OR52E2Q8NGJ4 325 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 OR5L1Q8NGL2 311 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 OR13G1Q8NGZ3 307 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 OR4K13Q8NH42 304 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 SGMS2Q8NHU3 365 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 CMTM5Q96DZ9 223 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 DHRS1Q96LJ7 313 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 C1orf147Q96MC9 270 aaPredicted RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 ZNF48Q96MX3 618 aaPredicted RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 PITX2Q99697 317 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 ELAC2Q9BQ52 826 aaKnown RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 FUZQ9BT04 418 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 IFT27Q9BW83 186 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 SSBP3Q9BWW4 388 aaPredicted RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 HCAR1Q9BXC0 346 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 MS4A7Q9GZW8 240 aaPredicted RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 OR52D1Q9H346 318 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 SRA1Q9HD15 236 aaKnown RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 RPRD1BQ9NQG5 326 aaKnown RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 DCAF13Q9NV06 445 aaKnown RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 B9D1Q9UPM9 204 aa5.6□□□□□ -1.51
FN1-220ENST00000480024 POLR3KQ9Y2Y1 108 aaPredicted RBP5.6□□□□□ -1.51
FN1-220ENST00000480024 NOTCH1P46531 2555 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 IGHV2-70DA0A0C4DH43 119 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 MDFIC2A0A1B0GVS7 189 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 LRRC30A6NM36 301 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 IQCF6A8MYZ5 107 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 IFNL4K9M1U5 179 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 ARPC2O15144 300 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 OR10H3O60404 316 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 LCATP04180 440 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 SEMG1P04279 462 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 FABP3P05413 133 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 WNT2P09544 360 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 ACSM4P0C7M7 580 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 PRTN3P24158 256 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 FPR3P25089 353 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 RRM2P31350 389 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 CD80P33681 288 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 MSX2P35548 267 aaPredicted RBP5.59□□□□□ -1.51
FN1-220ENST00000480024 RPS27P42677 84 aaKnown RBP5.59□□□□□ -1.51
FN1-220ENST00000480024 PITPNBP48739 271 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 SMIM11AP58511 58 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 HIST1H3AP68431 136 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 HOXA4Q00056 320 aaPredicted RBP5.59□□□□□ -1.51
FN1-220ENST00000480024 TRAP1Q12931 704 aaKnown RBP5.59□□□□□ -1.51
FN1-220ENST00000480024 MALLQ13021 153 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 BAMBIQ13145 260 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 GK2Q14410 553 aaPredicted RBP5.59□□□□□ -1.51
FN1-220ENST00000480024 RFX4Q33E94 735 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 ZNF404Q494X3 552 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 SLC36A3Q495N2 470 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 CLEC12AQ5QGZ9 265 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 SLC35F1Q5T1Q4 408 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 HIST2H3PS2Q5TEC6 136 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 PRAMEF6Q5VXH4 476 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 SLC18B1Q6NT16 456 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 BTNL3Q6UXE8 466 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 ZNF620Q6ZNG0 422 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 HIST2H3AQ71DI3 136 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 NLRC3Q7RTR2 1065 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 MRPL21Q7Z2W9 205 aaKnown RBP5.59□□□□□ -1.51
FN1-220ENST00000480024 C1orf87Q8N0U7 546 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 OR8B3Q8NGG8 313 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 OR2AJ1Q8NGZ0 328 aa5.59□□□□□ -1.51
FN1-220ENST00000480024 TAF15Q92804 592 aaKnown RBP eCLIP5.59□□□□□ -1.51
FN1-220ENST00000480024 NEIL1Q96FI4 390 aaPredicted RBP5.59□□□□□ -1.51
FN1-220ENST00000480024 OR8B2Q96RD0 313 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms