RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 SPANXN2Q5MJ10 180 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 AVPI1Q5T686 147 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 MBOAT2Q6ZWT7 520 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 SLC16A13Q7RTY0 426 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 HMGN2P46Q86SG4 172 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 OSR2Q8N2R0 312 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 CHST4Q8NCG5 386 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 OR52E5Q8NH55 327 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 OR51E1Q8TCB6 317 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 RGP1Q92546 391 aaPredicted RBP2.9□□□□□ -1.95
CCDC58-204ENST00000479414 OR10C1Q96KK4 312 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 FOXC2Q99958 501 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 BPIFA3Q9BQP9 254 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 UCK2Q9BZX2 261 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 FGF23Q9GZV9 251 aaPredicted RBP2.9□□□□□ -1.95
CCDC58-204ENST00000479414 ING2Q9H160 280 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 UBN2Q6ZU65 1347 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 SCN1AP35498 2009 aa2.9□□□□□ -1.95
CCDC58-204ENST00000479414 IGHV1OR15-9A0A0B4J2B8 117 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 C7orf66A4D0T2 115 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 GABRPO00591 440 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 BPY2O14599 106 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 NMT2O60551 498 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 REM1O75628 298 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 CCNE2O96020 404 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 ERCC1P07992 297 aaPredicted RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 CTRB1P17538 263 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 LOXP28300 417 aaPredicted RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 BMI1P35226 326 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 OPRK1P41145 380 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 NBL1P41271 181 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 UBE2MP61081 183 aaKnown RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 RPS23P62266 143 aaKnown RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 MERTKQ12866 999 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 DGCR6Q14129 220 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 ITIH4Q14624 930 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 QPRTQ15274 297 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 COX19Q49B96 90 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 C1orf185Q5T7R7 199 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 BHLHA15Q7RTS1 189 aaPredicted RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 MRPL55Q7Z7F7 128 aaKnown RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 FAM71AQ8IYT1 594 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 PQLC3Q8N755 202 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 NECAP1Q8NC96 275 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 OR56A4Q8NGH8 313 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 MCUR1Q96AQ8 359 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 C8orf44Q96CB5 159 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 ZNF2Q9BSG1 426 aaPredicted RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 TEKT3Q9BXF9 490 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 SAMD10Q9BYL1 202 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 DDX19AQ9NUU7 478 aaKnown RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 RAB20Q9NX57 234 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 LYARQ9NX58 379 aaKnown RBP2.89□□□□□ -1.95
CCDC58-204ENST00000479414 COMMD3-BMI1R4GMX3 469 aa2.89□□□□□ -1.95
CCDC58-204ENST00000479414 PALLDQ8WX93 1383 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 SMIM26A0A096LP01 95 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 TRAV40A0A0B4J280 105 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 OR6C74A6NCV1 312 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 MRPL19P49406 292 aaKnown RBP2.88□□□□□ -1.95
CCDC58-204ENST00000479414 CDK5Q00535 292 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 GBE1Q04446 702 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 RBMY1FQ15415 496 aaKnown RBP2.88□□□□□ -1.95
CCDC58-204ENST00000479414 PGGHGQ32M88 737 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 KRTAP13-2Q52LG2 175 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 NKAIN4Q8IVV8 208 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 TTC29Q8NA56 475 aaPredicted RBP2.88□□□□□ -1.95
CCDC58-204ENST00000479414 OR11H7Q8NGC8 314 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 OR52P1PQ8NH57 321 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 LINC01560Q8TB33 94 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 DYNLL2Q96FJ2 89 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 XPO6Q96QU8 1125 aaKnown RBP2.88□□□□□ -1.95
CCDC58-204ENST00000479414 SLC17A7Q9P2U7 560 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 PCDH11XQ9BZA7 1347 aa2.88□□□□□ -1.95
CCDC58-204ENST00000479414 PTPRTO14522 1441 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 COL22A1Q8NFW1 1626 aaPredicted RBP2.87□□□□□ -1.95
CCDC58-204ENST00000479414 A0A0J9YXV3 536 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 SERTM2A0A1B0GWG4 89 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 CCNB2O95067 398 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 RCBTB2O95199 551 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 HLA-DQA1P01909 254 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 ZNF14P17017 642 aaPredicted RBP2.87□□□□□ -1.95
CCDC58-204ENST00000479414 CXCL12P48061 93 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 GFERP55789 205 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 SYNJ2BPP57105 145 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 VSX2P58304 361 aaPredicted RBP2.87□□□□□ -1.95
CCDC58-204ENST00000479414 CACNG7P62955 275 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 IRF8Q02556 426 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 ZFP1Q6P2D0 407 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 TMEM53Q6P2H8 277 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 BZW1Q7L1Q6 419 aaKnown RBP2.87□□□□□ -1.95
CCDC58-204ENST00000479414 EIF3MQ7L2H7 374 aaKnown RBP2.87□□□□□ -1.95
CCDC58-204ENST00000479414 CENPQQ7L2Z9 268 aaPredicted RBP2.87□□□□□ -1.95
CCDC58-204ENST00000479414 LUZP2Q86TE4 346 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 GABRG1Q8N1C3 465 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 NRBF2Q96F24 287 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 C11orf70Q9BRQ4 267 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 TIMM29Q9BSF4 260 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 C8orf17Q9NRJ1 99 aa2.87□□□□□ -1.95
CCDC58-204ENST00000479414 RCL1Q9Y2P8 373 aaKnown RBP2.87□□□□□ -1.95
CCDC58-204ENST00000479414 GABRR3A8MPY1 467 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms