RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 C2orf66Q6UXQ4 117 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 MBOAT2Q6ZWT7 520 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 OAFQ86UD1 273 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF329Q86UD4 541 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 THOC6Q86W42 341 aaKnown RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 LRRC6Q86X45 466 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 NAXDQ8IW45 347 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 C6orf223Q8N319 242 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 TMEM252Q8N6L7 170 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ZFP41Q8N8Y5 198 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ATP6V1C2Q8NEY4 427 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 OR8U1Q8NH10 309 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 SPATA3Q8NHX4 192 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 FGF14Q92915 247 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 P2RX4Q99571 388 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RBBP8Q99708 897 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 OPRPNQ99935 248 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 UQCC2Q9BRT2 126 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 POLR2J2Q9GZM3 115 aaKnown RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 CHRNA10Q9GZZ6 450 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 POLR2J3Q9H1A7 115 aaKnown RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 WDR55Q9H6Y2 383 aaPredicted RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RPF2Q9H7B2 306 aaKnown RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 PTGES2Q9H7Z7 377 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 PLEKHA1Q9HB21 404 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 PLGRKTQ9HBL7 147 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 TMEM9BQ9NQ34 198 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 ABCB10Q9NRK6 738 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 SDHAF3Q9NRP4 125 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 VAPAQ9P0L0 249 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 SHPKQ9UHJ6 478 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 BTNL2Q9UIR0 455 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 UGT2A1Q9Y4X1 527 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 FLVCR1Q9Y5Y0 555 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 SPATA31E1Q6ZUB1 1445 aa3.26□□□□□ -1.89
VPS13D-207ENST00000476169 RNF17Q9BXT8 1623 aaKnown RBP3.26□□□□□ -1.89
VPS13D-207ENST00000476169 DHX57Q6P158 1386 aaKnown RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 SLIT1O75093 1534 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF726A6NNF4 738 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 MKRN2OSH3BPM6 223 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 K7EMT4 169 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 SOCS3O14543 225 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 RAD51BO15315 384 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ALOX12BO75342 701 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 PSIP1O75475 530 aaKnown RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 TRAPPC6AO75865 159 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 KBTBD11O94819 623 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 MYO1DO94832 1006 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 DUSP14O95147 198 aaKnown RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 GIMD1P0DJR0 217 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 GFAPP14136 432 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 HOXB6P17509 224 aaKnown RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 RAB5AP20339 215 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ARL2P36404 184 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 OR3A4PP47883 348 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 SLAMF1Q13291 335 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ARFRP1Q13795 201 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 OR2B11Q5JQS5 317 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 CDKL4Q5MAI5 379 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 APOBEC3HQ6NTF7 200 aaKnown RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 FAM151BQ6UXP7 276 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 UNQ9370/PRO34162Q6UXP9 181 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF600Q6ZNG1 722 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 TPGS1Q6ZTW0 290 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ZNF589Q86UQ0 364 aaPredicted RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 HIPK1Q86Z02 1210 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 CDKL3Q8IVW4 592 aaPredicted RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 CBR4Q8N4T8 237 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 VN1R2Q8NFZ6 395 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 OR4F15Q8NGB8 312 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 OR51S1Q8NGJ8 323 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 RASL10AQ92737 203 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 TMEM230Q96A57 120 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 RCN3Q96D15 328 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 B3GALT6Q96L58 329 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 COL21A1Q96P44 957 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 GPR21Q99679 349 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 APOL2Q9BQE5 337 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 RIOK2Q9BVS4 552 aaKnown RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 CCDC94Q9BW85 323 aaPredicted RBP3.25□□□□□ -1.89
VPS13D-207ENST00000476169 C20orf85Q9H1P6 137 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 SLC38A1Q9H2H9 487 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 TMBIM4Q9HC24 238 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 C6orf50Q9HD87 102 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ASF1AQ9Y294 204 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 FADS3Q9Y5Q0 445 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 STYXL1Q9Y6J8 313 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 ALKQ9UM73 1620 aa3.25□□□□□ -1.89
VPS13D-207ENST00000476169 CLTCQ00610 1675 aaKnown RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 RPRD2Q5VT52 1461 aaKnown RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 MYO3AQ8NEV4 1616 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 IGHV7-81A0A0B4J1V7 117 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 HIDE1A8MVS5 230 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 SHISA9B4DS77 424 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 ANKRD63C9JTQ0 380 aa3.24□□□□□ -1.89
VPS13D-207ENST00000476169 CDX4O14627 284 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 LIN7AO14910 233 aaPredicted RBP3.24□□□□□ -1.89
VPS13D-207ENST00000476169 SLC16A7O60669 478 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms