RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TMEM154Q6P9G4 183 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 USP51Q70EK9 711 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 NAA40Q86UY6 237 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 TIGD4Q8IY51 512 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 CIARTQ8N365 385 aaPredicted RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 RHOXF1Q8NHV9 184 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 TMEM163Q8TC26 289 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 GTF3AQ92664 365 aaKnown RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 ZMYND19Q96E35 227 aaPredicted RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 MARS2Q96GW9 593 aaKnown RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 C4orf45Q96LM5 186 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 SORCS2Q96PQ0 1159 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 AMELYQ99218 206 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 YTHDF1Q9BYJ9 559 aaKnown RBP11.24□□□□□ -0.61
TPM3-216ENST00000473036 OR51V1Q9H2C8 321 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 MARCH7Q9H992 704 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 PLEK2Q9NYT0 353 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.24□□□□□ -0.61
TPM3-216ENST00000473036 CMAHPQ9Y471 501 aa11.24□□□□□ -0.61
TPM3-216ENST00000473036 IGLV3-9A0A075B6K5 115 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 IRGMA1A4Y4 181 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 C5orf63A6NC05 138 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 H7C417 338 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 PRODHO43272 600 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 TLX2O43763 284 aaPredicted RBP11.23□□□□□ -0.61
TPM3-216ENST00000473036 GLCEO94923 617 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 ALDH3B1P43353 468 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 CXCR4P61073 352 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 IL5RAQ01344 420 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 RAB35Q15286 201 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 ALKBH6Q3KRA9 238 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 SLC35D3Q5M8T2 416 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 ELFN2Q5R3F8 820 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 C6orf52Q5T4I8 152 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 NXNL2Q5VZ03 156 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 ALDH16A1Q8IZ83 802 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 GJC3Q8NFK1 279 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 OR1J2Q8NGS2 313 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 OR1J1Q8NGS3 322 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 OR6K6Q8NGW6 343 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 SLC25A40Q8TBP6 338 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 ST7LQ8TDW4 575 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 UBE2FQ969M7 185 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 OTULINQ96BN8 352 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 Q96MF0 132 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 COQ7Q99807 217 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 KCNG2Q9UJ96 466 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 BLOC1S6Q9UL45 172 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 LRCH1Q9Y2L9 728 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 CR1P17927 2039 aa11.23□□□□□ -0.61
TPM3-216ENST00000473036 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 SLC22A31A6NKX4 558 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 ZNF593O00488 134 aaPredicted RBP11.22□□□□□ -0.61
TPM3-216ENST00000473036 SELENOFO60613 162 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 LCKP06239 509 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 FMO3P31513 532 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 ENTPD1P49961 510 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 HCCSP53701 268 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 ISL1P61371 349 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 TEX30Q5JUR7 227 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 LCN1P1Q5VSP4 162 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 AADACL4Q5VUY2 407 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 RGS7BPQ6MZT1 257 aaPredicted RBP11.22□□□□□ -0.61
TPM3-216ENST00000473036 TCEANCQ8N8B7 351 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 OR10H5Q8NGA6 315 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 ABHD4Q8TB40 342 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 SCN3BQ9NY72 215 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 POLR1DQ9Y2S0 133 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 STARD10Q9Y365 291 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 RPL36Q9Y3U8 105 aaKnown RBP11.22□□□□□ -0.61
TPM3-216ENST00000473036 SPEF1Q9Y4P9 236 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 PCDHGB1Q9Y5G3 927 aa11.22□□□□□ -0.61
TPM3-216ENST00000473036 PRR32B1ATL7 298 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 INAFM1C9JVW0 142 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 CRLF1O75462 422 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 ADRA2AP08913 450 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 SPARCP09486 303 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 ACSM4P0C7M7 580 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 ZNF823P16415 610 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 GSTT1P30711 240 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 RAD52P43351 418 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 EVX1P49640 407 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 PPP1CBP62140 327 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 SNRPD2P62316 118 aaKnown RBP11.21□□□□□ -0.61
TPM3-216ENST00000473036 POU4F2Q12837 409 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 APOFQ13790 326 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 KLHL22Q53GT1 634 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 COLCA1Q6ZS62 124 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 DPY19L4Q7Z388 723 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 DCXRQ7Z4W1 244 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 ERI1Q8IV48 349 aaKnown RBP11.21□□□□□ -0.61
TPM3-216ENST00000473036 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
TPM3-216ENST00000473036 IPCEF1Q8WWN9 437 aaPredicted RBP11.21□□□□□ -0.61
TPM3-216ENST00000473036 IL4I1Q96RQ9 567 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 CDADC1Q9BWV3 514 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 BCL2L14Q9BZR8 327 aa11.21□□□□□ -0.61
TPM3-216ENST00000473036 HDHD2Q9H0R4 259 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms