RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 LEG1Q6P5S2 330 aa16.59■□□□□ 0.25
COL9A3-210ENST00000472880 CORO6Q6QEF8 472 aa16.59■□□□□ 0.25
COL9A3-210ENST00000472880 DOK3Q7L591 496 aa16.59■□□□□ 0.25
COL9A3-210ENST00000472880 BHLHE23Q8NDY6 225 aa16.59■□□□□ 0.25
COL9A3-210ENST00000472880 SSBP3Q9BWW4 388 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-210ENST00000472880 ZMAT3Q9HA38 289 aaKnown RBP16.59■□□□□ 0.25
COL9A3-210ENST00000472880 V9GYQ6 96 aa16.59■□□□□ 0.25
COL9A3-210ENST00000472880 IGLV1-36A0A0B4J1U3 117 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 IQCF6A8MYZ5 107 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 DCTN6O00399 190 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 DCTN3O75935 186 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 CYB5R3P00387 301 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-210ENST00000472880 SMIM11AP58511 58 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 HIST1H3AP68431 136 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 SPIBQ01892 262 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 COX10Q12887 443 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 KLF17Q5JT82 389 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-210ENST00000472880 HIST2H3PS2Q5TEC6 136 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 HIST2H3AQ71DI3 136 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 HCAR1Q9BXC0 346 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 OR52D1Q9H346 318 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 WDR76Q9H967 626 aa16.58■□□□□ 0.24
COL9A3-210ENST00000472880 DNAJC9-AS1A6NH13 148 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 LRRC30A6NM36 301 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 H0YL77 283 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 MLNRO43193 412 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 ZNF205O95201 554 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 GADD45GO95257 159 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 SELEP16581 610 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 CPT2P23786 658 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 GNB2P62879 340 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 FOXL1Q12952 345 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 BTNL3Q6UXE8 466 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 MOGAT3Q86VF5 341 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 C1orf87Q8N0U7 546 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 RNF148Q8N7C7 305 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 SLC26A10Q8NG04 563 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 PLEKHA8Q96JA3 519 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 DUX5Q96PT3 197 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 CCT8L2Q96SF2 557 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 NMNAT3Q96T66 252 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 SLC30A2Q9BRI3 323 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 FUZQ9BT04 418 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 MS4A7Q9GZW8 240 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-210ENST00000472880 SRA1Q9HD15 236 aaKnown RBP16.57■□□□□ 0.24
COL9A3-210ENST00000472880 B9D1Q9UPM9 204 aa16.57■□□□□ 0.24
COL9A3-210ENST00000472880 IGHV3-64DA0A0J9YX35 117 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 F5H5P2 479 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 ARPC3O15145 178 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 WNT2P09544 360 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 HKR1P10072 659 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 EGR1P18146 543 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 PRTN3P24158 256 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 NOS3P29474 1203 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 BAMBIQ13145 260 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 ZNF181Q2M3W8 571 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 TUSC1Q2TAM9 212 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 RFX4Q33E94 735 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 SLC36A3Q495N2 470 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 CFAP77Q6ZQR2 320 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 KLBQ86Z14 1044 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 LINC00346Q8IVM7 164 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 OR6V1Q8N148 313 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 OR2AJ1Q8NGZ0 328 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 OR4K13Q8NH42 304 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 PITX2Q99697 317 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 IFT27Q9BW83 186 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 CDADC1Q9BWV3 514 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 RPRD1BQ9NQG5 326 aaKnown RBP16.56■□□□□ 0.24
COL9A3-210ENST00000472880 TMEM100Q9NV29 134 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 ARL8BQ9NVJ2 186 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 MIOXQ9UGB7 285 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 TAGLN3Q9UI15 199 aa16.56■□□□□ 0.24
COL9A3-210ENST00000472880 F5H5K5 113 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 OR10H3O60404 316 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 HLA-DQA2P01906 255 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 IRF2P14316 349 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 HIST1H1CP16403 213 aaKnown RBP16.55■□□□□ 0.24
COL9A3-210ENST00000472880 FPR3P25089 353 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 PAX8Q06710 450 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 ECH1Q13011 328 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 MALLQ13021 153 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 SLC18B1Q6NT16 456 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 LRRN1Q6UXK5 716 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 NLRC3Q7RTR2 1065 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 BCL6BQ8N143 479 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-210ENST00000472880 PARP8Q8N3A8 854 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 OR8B3Q8NGG8 313 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 OR52E2Q8NGJ4 325 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 MCUR1Q96AQ8 359 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 NEIL1Q96FI4 390 aaPredicted RBP16.55■□□□□ 0.24
COL9A3-210ENST00000472880 PYURFQ96I23 114 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 OR8B2Q96RD0 313 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 ATF6BQ99941 703 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 C1QTNF5Q9BXJ0 243 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 GORASP2Q9H8Y8 452 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 TMEM165Q9HC07 324 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 FAM53CQ9NYF3 392 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 MAGEL2Q9UJ55 1249 aa16.55■□□□□ 0.24
COL9A3-210ENST00000472880 PCDHGB1Q9Y5G3 927 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms