RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 STOMP27105 288 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 EPHA3P29320 983 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 RBM34P42696 430 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 CDKN2CP42773 168 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 MAGEB1P43366 347 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 MRPL19P49406 292 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 RGS6P49758 472 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 NPY4RP50391 375 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 MVDP53602 400 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SLC18A1P54219 525 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 BIDP55957 195 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 TPTEP56180 551 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 NME5P56597 212 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 UFM1P61960 85 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 BTG1P62324 171 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 MRPS34P82930 218 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 HOXA4Q00056 320 aaPredicted RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 SCRN3Q0VDG4 424 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 BST1Q10588 318 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 ZNF154Q13106 437 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SCARB2Q14108 478 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 MAD2L1BPQ15013 274 aaPredicted RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 OR1Q1Q15612 314 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 ZNF74Q16587 644 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 CYP51A1Q16850 503 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 MIDNQ504T8 468 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 TTMPQ5BVD1 217 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 C10orf128Q5T292 105 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 LRIF1Q5T3J3 769 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 WDR93Q6P2C0 686 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SLC2A7Q6PXP3 512 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 C9orf139Q6ZV77 190 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 OLIG3Q7RTU3 272 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 HMGN2P46Q86SG4 172 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 PATL1Q86TB9 770 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 MYPOPQ86VE0 399 aaPredicted RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 ZNF584Q8IVC4 421 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 WDFY1Q8IWB7 410 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 ZCCHC24Q8N2G6 241 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 KDM8Q8N371 416 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 CLIP4Q8N3C7 705 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 ICA1LQ8NDH6 482 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 OR4K5Q8NGD3 323 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 OR5L1Q8NGL2 311 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 OR1J1Q8NGS3 322 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SLC26A7Q8TE54 656 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 TMEM54Q969K7 222 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 YIPF5Q969M3 257 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 MAELQ96JY0 434 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 RBP7Q96R05 134 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SORT1Q99523 831 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 SH3GL1Q99961 368 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 PAIP2Q9BPZ3 127 aaKnown RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 ALG12Q9BV10 488 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 CENPHQ9H3R5 247 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 WDR55Q9H6Y2 383 aaPredicted RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 BEX1Q9HBH7 125 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 KCNK9Q9NPC2 374 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 NOX4Q9NPH5 578 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 UBAP1Q9NZ09 502 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 IL19Q9UHD0 177 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 ATPIF1Q9UII2 106 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 BAG5Q9UL15 447 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 PPP1R3CQ9UQK1 317 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 CAB39Q9Y376 341 aaPredicted RBP2.95□□□□□ -1.94
XRN1-209ENST00000472625 PCDHGB1Q9Y5G3 927 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 NPTNQ9Y639 398 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 POMT1Q9Y6A1 747 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 USH1CQ9Y6N9 552 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 HEATR5AQ86XA9 2040 aa2.95□□□□□ -1.94
XRN1-209ENST00000472625 CMYA5Q8N3K9 4069 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 IGKV1D-42A0A075B6H8 117 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 C5orf49A4QMS7 147 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 TRAPPC13A5PLN9 417 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 BTBD17A6NE02 478 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 A6NIZ1 184 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 C12orf71A8MTZ7 269 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MS4A18H0YCH9 400 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 RAB27BO00194 218 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 XKRYO14609 159 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 PHYHO14832 338 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ANGPT2O15123 496 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ITM2AO43736 263 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ENSAO43768 121 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 AHCYL1O43865 530 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 SNNO75324 88 aaPredicted RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 IGHV1-46P01743 117 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 IGHV2-70P01814 119 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 LIPFP07098 398 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ANXA2P07355 339 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 CST2P09228 141 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 QDPRP09417 244 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ASAH2BP0C7U1 165 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 COX5BP10606 129 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 RPS2P15880 293 aaKnown RBP2.94□□□□□ -1.94
XRN1-209ENST00000472625 SELEP16581 610 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 ZNF12P17014 697 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 MSR1P21757 451 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 BGNP21810 368 aa2.94□□□□□ -1.94
XRN1-209ENST00000472625 COL8A2P25067 703 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms