RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 IER3P46695 156 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 TAS2R41P59536 307 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 GUCY1A3Q02108 690 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 MPPED2Q15777 294 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 ZNF181Q2M3W8 571 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 VMACQ2NL98 169 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 MESTQ5EB52 335 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 RABL3Q5HYI8 236 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 INTS11Q5TA45 600 aaKnown RBP7.7□□□□□ -1.18
VCL-204ENST00000472585 FBXW12Q6X9E4 464 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 GDPGP1Q6ZNW5 385 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 Q6ZTK2 550 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 HDDC2Q7Z4H3 204 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 CALHM3Q86XJ0 350 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 ZSCAN4Q8NAM6 433 aaPredicted RBP7.7□□□□□ -1.18
VCL-204ENST00000472585 BPIFA2Q96DR5 249 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 C7orf26Q96N11 449 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 PCGF1Q9BSM1 259 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 SIRPDQ9H106 197 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 SMURF1Q9HCE7 757 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 TUBG2Q9NRH3 451 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
VCL-204ENST00000472585 CLN8Q9UBY8 286 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 RAB21Q9UL25 225 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 MED31Q9Y3C7 131 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 ADAM18Q9Y3Q7 739 aa7.7□□□□□ -1.18
VCL-204ENST00000472585 C12orf71A8MTZ7 269 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 ZNF879B4DU55 563 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 J3KTA2 159 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 CDC42EP2O14613 210 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 FFAR1O14842 300 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 XPNPEP2O43895 674 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 IFI30P13284 250 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 CD33P20138 364 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 RAD23AP54725 363 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 HIST1H3AP68431 136 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 ELF3P78545 371 aaPredicted RBP7.69□□□□□ -1.18
VCL-204ENST00000472585 PRB3Q04118 309 aaPredicted RBP7.69□□□□□ -1.18
VCL-204ENST00000472585 COX10Q12887 443 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 HIST2H3PS2Q5TEC6 136 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 PRAMEF6Q5VXH4 476 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 DHRS7BQ6IAN0 325 aaPredicted RBP7.69□□□□□ -1.18
VCL-204ENST00000472585 NANOGP8Q6NSW7 305 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 C11orf87Q6NUJ2 197 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 TBPL2Q6SJ96 375 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 ARL9Q6T311 187 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 DCDC5Q6ZRR9 648 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 HIST2H3AQ71DI3 136 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 FAM122BQ7Z309 247 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 NAA40Q86UY6 237 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 PDZD9Q8IXQ8 264 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 FGFRL1Q8N441 504 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 PCYOX1LQ8NBM8 494 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 BHLHE23Q8NDY6 225 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 OR8B3Q8NGG8 313 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 OR13C2Q8NGS9 318 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 OR13G1Q8NGZ3 307 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 OR1F12Q8NHA8 337 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 SLC26A7Q8TE54 656 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 GATAD2BQ8WXI9 593 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 LRTOMTQ8WZ04 291 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 Q96M85 177 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 WWC2-AS2Q96NR7 200 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 OR8B2Q96RD0 313 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 SEMA6AQ9H2E6 1030 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 DPAGT1Q9H3H5 408 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 C16orf95Q9H693 158 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 TMBIM4Q9HC24 238 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 STX18Q9P2W9 335 aaKnown RBP7.69□□□□□ -1.18
VCL-204ENST00000472585 RHCGQ9UBD6 479 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 TMCC3Q9ULS5 477 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 COA3Q9Y2R0 106 aaPredicted RBP7.69□□□□□ -1.18
VCL-204ENST00000472585 NDUFAF1Q9Y375 327 aa7.69□□□□□ -1.18
VCL-204ENST00000472585 IGHV1-69DA0A0B4J2H0 117 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 LOC100653049A0A140TA62 436 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 MEGF11A6BM72 1044 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 IQCF6A8MYZ5 107 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 IFNL4K9M1U5 179 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 FXYD1O00168 92 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 DCTN6O00399 190 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 PHYHO14832 338 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 FAM20BO75063 409 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 KRT34O76011 436 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 TOX4O94842 621 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 IGHV1-69P01742 117 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 GATA4P43694 442 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 YAP1P46937 504 aaKnown RBP7.68□□□□□ -1.18
VCL-204ENST00000472585 SRP9P49458 86 aaKnown RBP7.68□□□□□ -1.18
VCL-204ENST00000472585 ARF6P62330 175 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 PRKCDQ05655 676 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 EGR3Q06889 387 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 SCRN3Q0VDG4 424 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 MEP1BQ16820 701 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 KRTAP27-1Q3LI81 207 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 SFRP4Q6FHJ7 346 aaPredicted RBP7.68□□□□□ -1.18
VCL-204ENST00000472585 COLCA1Q6ZS62 124 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 NLRC3Q7RTR2 1065 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 TSEN54Q7Z6J9 526 aaKnown RBP7.68□□□□□ -1.18
VCL-204ENST00000472585 NRMQ8IXM6 262 aa7.68□□□□□ -1.18
VCL-204ENST00000472585 Q8TCH9 128 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms