RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 AGKQ53H12 422 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 SLC39A4Q6P5W5 647 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 CENPUQ71F23 418 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 LINC01551Q86U37 167 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 PHF13Q86YI8 300 aaPredicted RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 FUNDC1Q8IVP5 155 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 MFSD6LQ8IWD5 586 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 PRSS58Q8IYP2 241 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 HS3ST5Q8IZT8 346 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 CMTM8Q8IZV2 173 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ZFP82Q8N141 532 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 TMEM156Q8N614 296 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 SYT14Q8NB59 555 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 MFSD9Q8NBP5 474 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 MDS2Q8NDY4 140 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 CCDC54Q8NEL0 328 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ACTRT1Q8TDG2 376 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 CXorf40AQ8TE69 158 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 DNAJB3Q8WWF6 145 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ACOT11Q8WXI4 607 aaPredicted RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 CDS1Q92903 461 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 NAT6Q93015 286 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 SGTBQ96EQ0 304 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 CELF6Q96J87 481 aaKnown RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 EBNA1BP2Q99848 306 aaKnown RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 NIPSNAP1Q9BPW8 284 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 CBWD1Q9BRT8 395 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ZNF2Q9BSG1 426 aaPredicted RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 DCUN1D5Q9BTE7 237 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 RSG1Q9BU20 258 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ZNF426Q9BUY5 554 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 TIPINQ9BVW5 301 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 DDA1Q9BW61 102 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ZNF717Q9BY31 904 aaPredicted RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 NARFLQ9H6Q4 476 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ELOVL3Q9HB03 270 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 FBXO8Q9NRD0 319 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 DDX19AQ9NUU7 478 aaKnown RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 SMOXQ9NWM0 555 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 RMND1Q9NWS8 449 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 LYARQ9NX58 379 aaKnown RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 PTTG3PQ9NZH4 202 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 COPS7AQ9UBW8 275 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 OPN4Q9UHM6 478 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 SMPXQ9UHP9 88 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 TSSC4Q9Y5U2 329 aaPredicted RBP2.51□□□□□ -2.01
CD46-213ENST00000471987 KPTNQ9Y664 436 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 SLC22A7Q9Y694 548 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 MYO15BQ96JP2 1530 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 ATP10AO60312 1499 aa2.51□□□□□ -2.01
CD46-213ENST00000471987 PNPLA6Q8IY17 1366 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 JCADQ9P266 1359 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ZNF532Q9HCE3 1301 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 KCNE1BA0A087WTH5 132 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 A0A1B0GVL5 298 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 RFPL4AA6NLU0 287 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 LINC00587B1AMM8 73 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 RFPL4AL1F8VTS6 287 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 K7ENP7 123 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ACOX3O15254 700 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 TM9SF1O15321 606 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 B4GALT5O43286 388 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 XRCC2O43543 280 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 GMDSO60547 372 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 UGT1A9O60656 530 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 TOM1O60784 492 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ENTPD5O75356 428 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 MED6O75586 246 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 GATBO75879 557 aaKnown RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 ETHE1O95571 254 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 KRT75O95678 551 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 IFNA5P01569 189 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 RD3LP0DJH9 198 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 PGAM1P18669 254 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 VDAC1P21796 283 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 BGNP21810 368 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 CXCR2P25025 360 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 S100PP25815 95 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 KDELR2P33947 212 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 MPIP34949 423 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 SERPINB5P36952 375 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 MAP3K8P41279 467 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 SLC6A8P48029 635 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 GABRA4P48169 554 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 CYB561P49447 251 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 DUSP3P51452 185 aaPredicted RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 AP2S1P53680 142 aaPredicted RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 GNG2P59768 71 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 HERVK_113P63132 956 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ERVK-25P63136 954 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 TFAMQ00059 246 aaKnown RBP2.5□□□□□ -2.01
CD46-213ENST00000471987 PJVKQ0ZLH3 352 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 TRAM2Q15035 370 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 CYTH1Q15438 398 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 SLC9A3R2Q15599 337 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ZBTB6Q15916 424 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 DEFB115Q30KQ5 88 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 OR2A2Q6IF42 318 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 ADNP2Q6IQ32 1131 aa2.5□□□□□ -2.01
CD46-213ENST00000471987 SLC8B1Q6J4K2 584 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms