RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ENPP5Q9UJA9 477 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 ERRFI1Q9UJM3 462 aaPredicted RBP8.53□□□□□ -1.04
CCM2-204ENST00000470837 CEPT1Q9Y6K0 416 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 BOD1L1Q8NFC6 3051 aa8.53□□□□□ -1.04
CCM2-204ENST00000470837 ATMQ13315 3056 aa8.52□□□□□ -1.04
CCM2-204ENST00000470837 ZZEF1O43149 2961 aa8.52□□□□□ -1.04
CCM2-204ENST00000470837 SVILO95425 2214 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 A0A1B0GVI7 797 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 C5orf49A4QMS7 147 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 OR5H1A6NKK0 313 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 SLC22A1O15245 554 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 LRRTM2O43300 516 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 SYNGR3O43761 229 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 GATBO75879 557 aaKnown RBP8.52□□□□□ -1.05
CCM2-204ENST00000470837 ARL6IP5O75915 188 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 GABARAPO95166 117 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 LCATP04180 440 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 SERPINA5P05154 406 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 CD2P06729 351 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 MMP7P09237 267 aaPredicted RBP8.52□□□□□ -1.05
CCM2-204ENST00000470837 ZNF12P17014 697 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 GALP22466 123 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 MYL9P24844 172 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 ASCL1P50553 236 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 ZNF121P58317 390 aaPredicted RBP8.52□□□□□ -1.05
CCM2-204ENST00000470837 LSM3P62310 102 aaKnown RBP8.52□□□□□ -1.05
CCM2-204ENST00000470837 RPS25P62851 125 aaKnown RBP8.52□□□□□ -1.05
CCM2-204ENST00000470837 TUBA1BP68363 451 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 TSC22D1Q15714 1073 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 ODF4Q2M2E3 257 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 C4orf17Q53FE4 359 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 WDR38Q5JTN6 314 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 TIMM23BQ5SRD1 257 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 ALKBH2Q6NS38 261 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 FAM57BQ71RH2 274 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 TUBA1AQ71U36 451 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 CATSPERDQ86XM0 798 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 SLC30A7Q8NEW0 376 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 OR10S1Q8NGN2 331 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 HSD17B8Q92506 261 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 BOD1Q96IK1 185 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 KCTD7Q96MP8 289 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 KCNS3Q9BQ31 491 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 ACTR6Q9GZN1 396 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 PBOV1Q9GZY1 135 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 SLITRK2Q9H156 845 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 OR51E2Q9H255 320 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 CDH20Q9HBT6 801 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 SLC24A3Q9HC58 644 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 PNRC2Q9NPJ4 139 aaKnown RBP8.52□□□□□ -1.05
CCM2-204ENST00000470837 NUFIP1Q9UHK0 495 aaKnown RBP8.52□□□□□ -1.05
CCM2-204ENST00000470837 ALPK2Q86TB3 2170 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 KIAA1549Q9HCM3 1950 aa8.52□□□□□ -1.05
CCM2-204ENST00000470837 TRDV1A0A1B0GX56 115 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 A0A1W2PR80 420 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 FAM90A27PA6NNH2 459 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 ZNF879B4DU55 563 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 SYT7O43581 403 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 MTRF1O75570 445 aaKnown RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 ZFPL1O95159 310 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 OCM2P0CE71 109 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 SLC2A1P11166 492 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 CBR1P16152 277 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 PPP3CBP16298 524 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 NR4A1P22736 598 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 GNLYP22749 145 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 CFL1P23528 166 aaKnown RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 APEX1P27695 318 aaKnown RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 TGFBR2P37173 567 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 IDH3GP51553 393 aaPredicted RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 NANOS3P60323 173 aaKnown RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 MFGE8Q08431 387 aaPredicted RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 MALLQ13021 153 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 GFOD2Q3B7J2 385 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 ACSM3Q53FZ2 586 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 STAC2Q6ZMT1 411 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 NCCRP1Q6ZVX7 275 aaPredicted RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 USP43Q70EL4 1123 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 CEACAM19Q7Z692 300 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 ELMOD2Q8IZ81 293 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 OR5L1Q8NGL2 311 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 FGFBP3Q8TAT2 258 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 ABHD4Q8TB40 342 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 PHYHIPQ92561 330 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 S100PBPQ96BU1 408 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 OR10A4Q9H209 315 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 PLEKHA1Q9HB21 404 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 NGBQ9NPG2 151 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 KCNJ16Q9NPI9 418 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 FAM206AQ9NX38 181 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 CKLFQ9UBR5 152 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 ZNF391Q9UJN7 358 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 HHLA2Q9UM44 414 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 DHDHQ9UQ10 334 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 SLC22A13Q9Y226 551 aa8.51□□□□□ -1.05
CCM2-204ENST00000470837 SIRT4Q9Y6E7 314 aaPredicted RBP8.51□□□□□ -1.05
CCM2-204ENST00000470837 LOC107986453A0A1B0GWG9 222 aa8.5□□□□□ -1.05
CCM2-204ENST00000470837 OR4C45A6NMZ5 311 aa8.5□□□□□ -1.05
CCM2-204ENST00000470837 H3BMQ9 156 aa8.5□□□□□ -1.05
CCM2-204ENST00000470837 GABRPO00591 440 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms