RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 ENTPD1P49961 510 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 CHN2P52757 468 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 CDK5R2Q13319 367 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 TSTQ16762 297 aaKnown RBP12.03□□□□□ -0.48
TOP3B-215ENST00000470338 KRTAP21-3Q3LHN1 58 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 C6orf52Q5T4I8 152 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 FAHD1Q6P587 224 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 ATG16L2Q8NAA4 619 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 HPS1Q92902 700 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 DIRC2Q96SL1 478 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 MED20Q9H944 212 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 MARCH7Q9H992 704 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 YAE1D1Q9NRH1 226 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 ZNF275Q9NSD4 429 aaPredicted RBP12.03□□□□□ -0.48
TOP3B-215ENST00000470338 DECR2Q9NUI1 292 aa12.03□□□□□ -0.48
TOP3B-215ENST00000470338 FAM183AA6NL82 134 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 A8MV72 311 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-215ENST00000470338 F5H5K5 113 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 ZNF593O00488 134 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-215ENST00000470338 SURF4O15260 269 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 SPRY3O43610 288 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 TIMM8AO60220 97 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-215ENST00000470338 CRLF1O75462 422 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 CD55P08174 381 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 FASP25445 335 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 OTX1P32242 354 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-215ENST00000470338 GPR6P46095 362 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-215ENST00000470338 DAPP51397 102 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 HLXQ14774 488 aaPredicted RBP12.02□□□□□ -0.49
TOP3B-215ENST00000470338 TRIP10Q15642 601 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 ZMAT1Q5H9K5 638 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 DCXRQ7Z4W1 244 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 NAA40Q86UY6 237 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 HIPK1Q86Z02 1210 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 PARP8Q8N3A8 854 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 SAP30LQ9HAJ7 183 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 SLC25A19Q9HC21 320 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 MSL2Q9HCI7 577 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 DDX28Q9NUL7 540 aaKnown RBP12.02□□□□□ -0.49
TOP3B-215ENST00000470338 PTTG3PQ9NZH4 202 aa12.02□□□□□ -0.49
TOP3B-215ENST00000470338 JMJD1CQ15652 2540 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 IGHV1-69-2A0A0G2JMI3 117 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 LRP5LA4QPB2 252 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 CDC14BO60729 498 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 CIB2O75838 187 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 GLCEO94923 617 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 PAICSP22234 425 aaKnown RBP12.01□□□□□ -0.49
TOP3B-215ENST00000470338 CRISP1P54107 249 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 TPTEP56180 551 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 Q6ZR03 302 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 CCDC121Q6ZUS5 278 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 USP51Q70EK9 711 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 OR6K6Q8NGW6 343 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 ST7LQ8TDW4 575 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 MSI2Q96DH6 328 aaKnown RBP12.01□□□□□ -0.49
TOP3B-215ENST00000470338 C1orf159Q96HA4 380 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 SOX7Q9BT81 388 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 EGLN1Q9GZT9 426 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 PAPOLBQ9NRJ5 636 aaKnown RBP12.01□□□□□ -0.49
TOP3B-215ENST00000470338 TMEM160Q9NX00 188 aa12.01□□□□□ -0.49
TOP3B-215ENST00000470338 PRR23D1E9PI22 279 aaPredicted RBP12□□□□□ -0.49
TOP3B-215ENST00000470338 G3V2T6 193 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 M0R135 149 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 TPD52L2O43399 206 aaKnown RBP12□□□□□ -0.49
TOP3B-215ENST00000470338 PPIHO43447 177 aaKnown RBP12□□□□□ -0.49
TOP3B-215ENST00000470338 SPARCP09486 303 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 PRR23D2P0DMB1 279 aaPredicted RBP12□□□□□ -0.49
TOP3B-215ENST00000470338 FCGR1AP12314 374 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 GSTT1P30711 240 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 IL2RGP31785 369 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 SPRNQ5BIV9 151 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 TMEM236Q5W0B7 351 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 PLBD1Q6P4A8 553 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 AMIGO2Q86SJ2 522 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 CPOQ8IVL8 374 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 LRTOMTQ8WZ04 291 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 SPTSSAQ969W0 71 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 SLAMF6Q96DU3 332 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 ELMOD3Q96FG2 381 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 ZNF799Q96GE5 643 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 INTS14Q96SY0 518 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 KIF17Q9P2E2 1029 aa12□□□□□ -0.49
TOP3B-215ENST00000470338 LOC100289279A0A1B0GTE1 492 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 IQCF6A8MYZ5 107 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 WNT9BO14905 357 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 PRODHO43272 600 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 LCATP04180 440 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 ZNF16P17020 682 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-215ENST00000470338 ESRRGP62508 458 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 TNFAIP6P98066 277 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-215ENST00000470338 GK2Q14410 553 aaPredicted RBP11.99□□□□□ -0.49
TOP3B-215ENST00000470338 PTGES3Q15185 160 aaKnown RBP11.99□□□□□ -0.49
TOP3B-215ENST00000470338 HFEQ30201 348 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 KDM4DQ6B0I6 523 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 OR2T2Q6IF00 324 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 DRAM2Q6UX65 266 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 RHOUQ7L0Q8 258 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 DPY19L4Q7Z388 723 aa11.99□□□□□ -0.49
TOP3B-215ENST00000470338 ERI1Q8IV48 349 aaKnown RBP11.99□□□□□ -0.49
TOP3B-215ENST00000470338 TIGD4Q8IY51 512 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms