RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MITD1Q8WV92 249 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 ST8SIA4Q92187 359 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 FAM46BQ96A09 425 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 ZBTB8AQ96BR9 441 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 GAL3ST1Q99999 423 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 LDAHQ9H6V9 325 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 GPR160Q9UJ42 338 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 GON4LQ3T8J9 2241 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 A0A0C4DFX4 3053 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 IGLV3-12A0A075B6K2 115 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 DUX1O43812 170 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 SCGNO76038 276 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 SPDEFO95238 335 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 RNASE10Q5GAN6 216 aaKnown RBP12.16□□□□□ -0.46
BRCA1-209ENST00000470026 SLC25A53Q5H9E4 307 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 C1orf189Q5VU69 101 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 MOB3CQ70IA8 216 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 SLC22A24Q8N4F4 322 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 DTWD2Q8NBA8 298 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 OR1M1Q8NGA1 313 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 OR10S1Q8NGN2 331 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 NUBPLQ8TB37 319 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 C11orf40Q8WZ69 217 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 FGGYQ96C11 551 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 MRPS24Q96EL2 167 aaKnown RBP12.16□□□□□ -0.46
BRCA1-209ENST00000470026 ADAT3Q96EY9 351 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-209ENST00000470026 MRPL13Q9BYD1 178 aaKnown RBP12.16□□□□□ -0.46
BRCA1-209ENST00000470026 WDR13Q9H1Z4 485 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 SUSD2Q9UGT4 822 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 ANAPC10Q9UM13 185 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 B3GALT5Q9Y2C3 310 aa12.16□□□□□ -0.46
BRCA1-209ENST00000470026 ADAMTS9Q9P2N4 1935 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 RNF222A6NCQ9 220 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 LIPT2A6NK58 231 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 TMEM14DPA8MWL7 114 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 LGALS8O00214 317 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 HLA-AP01891 365 aaKnown RBP12.15□□□□□ -0.46
BRCA1-209ENST00000470026 VSIG8P0DPA2 414 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 TBPP20226 339 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 POU3F1Q03052 451 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-209ENST00000470026 SCGB2B2Q4G0G5 96 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 C17orf107Q6ZR85 190 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 TRAPPC6BQ86SZ2 158 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 STPG2Q8N412 459 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 PXT1Q8NFP0 134 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 OR52N4Q8NGI2 321 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 PHYHIPLQ96FC7 376 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 MED29Q9NX70 200 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 ALKBH4Q9NXW9 302 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 MYEF2Q9P2K5 600 aaKnown RBP12.15□□□□□ -0.46
BRCA1-209ENST00000470026 B3GAT1Q9P2W7 334 aa12.15□□□□□ -0.46
BRCA1-209ENST00000470026 FARSAQ9Y285 508 aaKnown RBP12.15□□□□□ -0.46
BRCA1-209ENST00000470026 BRWD1Q9NSI6 2320 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 TPD52L2O43399 206 aaKnown RBP12.14□□□□□ -0.47
BRCA1-209ENST00000470026 BCL2L11O43521 198 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 FBXW4P57775 412 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 CXADRP78310 365 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 TLE3Q04726 772 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 SQSTM1Q13501 440 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 ZNF273Q14593 569 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 HYAL4Q2M3T9 481 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 CDNFQ49AH0 187 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 C3orf33Q6P1S2 294 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 C16orf47Q6ZP98 133 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-209ENST00000470026 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-209ENST00000470026 ZBTB44Q8NCP5 570 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DDIT4LQ96D03 193 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 B3GNT4Q9C0J1 378 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 PBOV1Q9GZY1 135 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 CST11Q9H112 138 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 NOP16Q9Y3C1 178 aaKnown RBP12.14□□□□□ -0.47
BRCA1-209ENST00000470026 SPTBN5Q9NRC6 3674 aaKnown RBP12.14□□□□□ -0.47
BRCA1-209ENST00000470026 A0A1B0GW55 424 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUX4L2P0CJ85 424 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUX4L3P0CJ86 424 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUX4L4P0CJ87 422 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUX4L5P0CJ88 424 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUX4L6P0CJ89 424 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUX4L7P0CJ90 424 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 CLDN6P56747 220 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 FOXF1Q12946 379 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 BTN1A1Q13410 526 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 PPP1R1AQ13522 171 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 LIN54Q6MZP7 749 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 ARSKQ6UWY0 536 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 ACOT7LQ6ZUV0 252 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 RHOUQ7L0Q8 258 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 ADPRHL1Q8NDY3 354 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 RELTQ969Z4 430 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 CMBLQ96DG6 245 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUSP15Q9H1R2 295 aaPredicted RBP12.14□□□□□ -0.47
BRCA1-209ENST00000470026 LMAN1LQ9HAT1 526 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 SERINC1Q9NRX5 453 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 FGF21Q9NSA1 209 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 CENPMQ9NSP4 180 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 DUX4Q9UBX2 424 aa12.14□□□□□ -0.47
BRCA1-209ENST00000470026 IGLV3-32A0A0A0MS00 114 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms