RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 LINC01560Q8TB33 94 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 TMEM255BQ8WV15 326 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 TAAR8Q969N4 342 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 S100PBPQ96BU1 408 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF570Q96NI8 536 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 RAB3IPQ96QF0 476 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-208ENST00000469585 RBP7Q96R05 134 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 SEPHS2Q99611 448 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 BTBD10Q9BSF8 475 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 MAGIXQ9H6Y5 334 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 HIF1ANQ9NWT6 349 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 MALT1Q9UDY8 824 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 FBXO9Q9UK97 447 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-208ENST00000469585 CEPT1Q9Y6K0 416 aa5.42□□□□□ -1.54
PTCD3-208ENST00000469585 HEATR5AQ86XA9 2040 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 NCOA6Q14686 2063 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-208ENST00000469585 LRRK2Q5S007 2527 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 DOCK7Q96N67 2140 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 LOC102725191A0A1B0GVB3 256 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 A0A1W2PRQ8 180 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 SH3PXD2BA1X283 911 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 OR5H1A6NKK0 313 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 CENPBD1B2RD01 187 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 B4DXG7 233 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 C19orf84I3L1E1 186 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 M0R3G1 203 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 TNFRSF11BO00300 401 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 PLPP3O14495 311 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 ARHGEF9O43307 516 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 DOK2O60496 412 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 NPIPB7O75200 414 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 CCNB2O95067 398 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 CGAP01215 116 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 CRYAAP02489 173 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 RNF224P0DH78 156 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 FCGR1AP12314 374 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 PTNP21246 168 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 CRYGSP22914 178 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 PTAFRP25105 342 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 AMTP48728 403 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 UGT2B15P54855 530 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 BIDP55957 195 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 PCBD1P61457 104 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 H3F3AP84243 136 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 GALK2Q01415 458 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 TFF3Q07654 80 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 DGCR6Q14129 220 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF74Q16587 644 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 C6orf141Q5SZD1 244 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 C9orf135Q5VTT2 229 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 C1orf146Q5VVC0 180 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 C8orf82Q6P1X6 216 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-208ENST00000469585 TMEM53Q6P2H8 277 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 ARL9Q6T311 187 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 STAC2Q6ZMT1 411 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 MBOAT2Q6ZWT7 520 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 C10orf111Q8N326 155 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 Q8N9P0 234 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-208ENST00000469585 OR52J3Q8NH60 311 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 PIGTQ969N2 578 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 SLC25A44Q96H78 314 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-208ENST00000469585 LRR1Q96L50 414 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 WFIKKN1Q96NZ8 548 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 ALKBH3Q96Q83 286 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-208ENST00000469585 PRRG3Q9BZD7 231 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 LINC00470Q9BZP3 86 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 DENND2DQ9H6A0 471 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-208ENST00000469585 RNF121Q9H920 327 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 UBTD1Q9HAC8 227 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 NMNAT1Q9HAN9 279 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-208ENST00000469585 CCNB1IP1Q9NPC3 277 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 IL1RAPQ9NPH3 570 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 RHCGQ9UBD6 479 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 ENOPH1Q9UHY7 261 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 POLR1DQ9Y2S0 133 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 RNF115Q9Y4L5 304 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 ORC6Q9Y5N6 252 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 DOPEY1Q5JWR5 2465 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 PCNX1Q96RV3 2341 aa5.41□□□□□ -1.54
PTCD3-208ENST00000469585 CACNA1CQ13936 2221 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 IQCMA0A1B0GVH7 501 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 DHRS12A0PJE2 317 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 FAM90A8PA6NJQ4 464 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF716A6NP11 495 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 ZNF99A8MXY4 864 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-208ENST00000469585 M0R1B8 84 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 HSPA12AO43301 675 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 TMCC2O75069 709 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 PDE5AO76074 875 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 UBL3O95164 117 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 NDUFB2O95178 105 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 RENP00797 406 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 CST1P01037 141 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 IFNGP01579 166 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 BGLAPP02818 100 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 RAF1P04049 648 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 FAM90A13PP0C7W8 464 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 FAM90A24PP0C7X0 464 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 OR8G3PP0DMU2 310 aa5.4□□□□□ -1.54
PTCD3-208ENST00000469585 CD79AP11912 226 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms