RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 LBHQ53QV2 105 aaPredicted RBP3.69□□□□□ -1.82
HMGB1-207ENST00000468384 ACSBG2Q5FVE4 666 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 LCE1AQ5T7P2 110 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 LYPD2Q6UXB3 125 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 ZNF782Q6ZMW2 699 aaPredicted RBP3.69□□□□□ -1.82
HMGB1-207ENST00000468384 ZNF66Q6ZN08 573 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 ZNF534Q76KX8 674 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 PHF13Q86YI8 300 aaPredicted RBP3.69□□□□□ -1.82
HMGB1-207ENST00000468384 TIGD4Q8IY51 512 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 CSNK2A3Q8NEV1 391 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 OR2AJ1Q8NGZ0 328 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 BBS10Q8TAM1 723 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 LRRC39Q96DD0 335 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 OTUB1Q96FW1 271 aaPredicted RBP3.69□□□□□ -1.82
HMGB1-207ENST00000468384 SNF8Q96H20 258 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 TECTBQ96PL2 329 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 ZNF385AQ96PM9 386 aaKnown RBP3.69□□□□□ -1.82
HMGB1-207ENST00000468384 APOL2Q9BQE5 337 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 HSD3B7Q9H2F3 369 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 OR6C3Q9NZP0 311 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 MSRB1Q9NZV6 116 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 BCAP29Q9UHQ4 241 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 RNF150Q9ULK6 438 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 LRP12Q9Y561 859 aa3.69□□□□□ -1.82
HMGB1-207ENST00000468384 C5orf52A6NGY3 159 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 ZSCAN5BA6NJL1 495 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 ZNF587BE7ETH6 402 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 FOXE1O00358 373 aaPredicted RBP3.68□□□□□ -1.82
HMGB1-207ENST00000468384 PRMT5O14744 637 aaPredicted RBP3.68□□□□□ -1.82
HMGB1-207ENST00000468384 SELENOFO60613 162 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 FCMRO60667 390 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 NOL3O60936 208 aaKnown RBP3.68□□□□□ -1.82
HMGB1-207ENST00000468384 TTC4O95801 387 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 TBX6O95947 436 aaPredicted RBP3.68□□□□□ -1.82
HMGB1-207ENST00000468384 CD55P08174 381 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 NCK1P16333 377 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 HSD17B3P37058 310 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 SLC9A3P48764 834 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 RGS6P49758 472 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 UBE2E1P51965 193 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 P2RX3P56373 397 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 NME5P56597 212 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 NANOS2P60321 138 aaKnown RBP3.68□□□□□ -1.82
HMGB1-207ENST00000468384 KRTAP10-1P60331 282 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 STX1BP61266 288 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 EXOSC7Q15024 291 aaKnown RBP3.68□□□□□ -1.82
HMGB1-207ENST00000468384 OASLQ15646 514 aaKnown RBP3.68□□□□□ -1.82
HMGB1-207ENST00000468384 DECR1Q16698 335 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 ADPRMQ3LIE5 342 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 C18orf63Q68DL7 685 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 MON1BQ7L1V2 547 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 KCTD9Q7L273 389 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 ACOT4Q8N9L9 421 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 NEK11Q8NG66 645 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 OR2AK2Q8NG84 335 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 OR7G3Q8NG95 312 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 PAGE5Q96GU1 130 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 TSG101Q99816 390 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 ARHGDIGQ99819 225 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 CPNE1Q99829 537 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 FAM118BQ9BPY3 351 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 OR51B6Q9H340 312 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 DCLRE1BQ9H816 532 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 A4GALTQ9NPC4 353 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 RHCGQ9UBD6 479 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 IL19Q9UHD0 177 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 SLC7A8Q9UHI5 535 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 PITPNC1Q9UKF7 332 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 AURKCQ9UQB9 309 aa3.68□□□□□ -1.82
HMGB1-207ENST00000468384 RNF103-CHMP3A0A140T963 221 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 A0A1W2PPQ1 181 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 LINC01548A6NM66 108 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 FAM90A26D6RGX4 464 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 SPINT2O43291 252 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 PEX11AO75192 247 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 ANGPTL1O95841 491 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 RLN1P04808 185 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 MPZP25189 248 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 ATP5A1P25705 553 aaKnown RBP3.67□□□□□ -1.82
HMGB1-207ENST00000468384 BDKRB2P30411 391 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 PMELP40967 661 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 WNT5AP41221 380 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 EIF1P41567 113 aaKnown RBP3.67□□□□□ -1.82
HMGB1-207ENST00000468384 CAMLGP49069 296 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 HNMTP50135 292 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 ERVS71-1P61550 626 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 TNFAIP6P98066 277 aaPredicted RBP3.67□□□□□ -1.82
HMGB1-207ENST00000468384 ZNF91Q05481 1191 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 GABPB1Q06547 395 aaPredicted RBP3.67□□□□□ -1.82
HMGB1-207ENST00000468384 FOXF1Q12946 379 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 ZNF404Q494X3 552 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 CEP78Q5JTW2 689 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 KHDRBS2Q5VWX1 349 aaKnown RBP3.67□□□□□ -1.82
HMGB1-207ENST00000468384 PRAMEF7Q5VXH5 474 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 AGTRAPQ6RW13 159 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 SLC16A12Q6ZSM3 486 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 PQLC3Q8N755 202 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 C11orf40Q8WZ69 217 aa3.67□□□□□ -1.82
HMGB1-207ENST00000468384 TAAR8Q969N4 342 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms