RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SP140LQ9H930 580 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 TBCCD1Q9NVR7 557 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 GRIP1Q9Y3R0 1128 aa13.15□□□□□ -0.3
SNIP1-202ENST00000468040 PRR14LQ5THK1 2151 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 METTL15A6NJ78 407 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 PRR32B1ATL7 298 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 SHISA9B4DS77 424 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 PSMD9O00233 223 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 CTAG2O75638 210 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 CDK1P06493 297 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 TACSTD2P09758 323 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 NR4A1P22736 598 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 SLC6A9P48067 706 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 CX3CR1P49238 355 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 PRKXP51817 358 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 UCP2P55851 309 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 PSMA6P60900 246 aaKnown RBP13.14□□□□□ -0.31
SNIP1-202ENST00000468040 RPS23P62266 143 aaKnown RBP13.14□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF829Q3KNS6 432 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-202ENST00000468040 CDONQ4KMG0 1287 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF684Q5T5D7 378 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF704Q6ZNC4 412 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-202ENST00000468040 LHFPL3Q86UP9 236 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 SYS1Q8N2H4 156 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF283Q8N7M2 679 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 KBTBD8Q8NFY9 601 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 APOBEC3DQ96AK3 386 aaPredicted RBP13.14□□□□□ -0.31
SNIP1-202ENST00000468040 COG8Q96MW5 612 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 BCL2L14Q9BZR8 327 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 MRM2Q9UI43 246 aaKnown RBP13.14□□□□□ -0.31
SNIP1-202ENST00000468040 ATP23Q9Y6H3 246 aa13.14□□□□□ -0.31
SNIP1-202ENST00000468040 USP9YO00507 2555 aaPredicted RBP13.13□□□□□ -0.31
SNIP1-202ENST00000468040 SPTAN1Q13813 2472 aaKnown RBP13.13□□□□□ -0.31
SNIP1-202ENST00000468040 RGS10O43665 173 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 SMPD2O60906 423 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 FAM157BP0CG42 384 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 LIMS3P0CW19 117 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 LIMS4P0CW20 117 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 TUBG1P23258 451 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 EEF1B2P24534 225 aaKnown RBP13.13□□□□□ -0.31
SNIP1-202ENST00000468040 SSTR2P30874 369 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 WNT5AP41221 380 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 GABARAPL2P60520 117 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 HGFACQ04756 655 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 SNTB2Q13425 540 aaKnown RBP13.13□□□□□ -0.31
SNIP1-202ENST00000468040 RNLSQ5VYX0 342 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 TMPRSS11AQ6ZMR5 421 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF101Q8IZC7 436 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 YIPF7Q8N8F6 280 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 OR5L1Q8NGL2 311 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 ABHD4Q8TB40 342 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 HAVCR2Q8TDQ0 301 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 MARVELD3Q96A59 401 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF649Q9BS31 505 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 C1QTNF5Q9BXJ0 243 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 CLEC4MQ9H2X3 399 aaPredicted RBP13.13□□□□□ -0.31
SNIP1-202ENST00000468040 TUBG2Q9NRH3 451 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 CA10Q9NS85 328 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 PAK1IP1Q9NWT1 392 aaPredicted RBP13.13□□□□□ -0.31
SNIP1-202ENST00000468040 GNG8Q9UK08 70 aa13.13□□□□□ -0.31
SNIP1-202ENST00000468040 CAB39Q9Y376 341 aaPredicted RBP13.13□□□□□ -0.31
SNIP1-202ENST00000468040 TMEM269A0A1B0GVZ9 245 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ACOD1A6NK06 481 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 MAGEB4O15481 346 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-202ENST00000468040 LCATP04180 440 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ANXA2P07355 339 aaKnown RBP13.12□□□□□ -0.31
SNIP1-202ENST00000468040 C21orf33P30042 268 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-202ENST00000468040 GLRXP35754 106 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ETV1P50549 477 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 MMP16P51512 607 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-202ENST00000468040 NKX6-1P78426 367 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-202ENST00000468040 MVKQ03426 396 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 TLE4Q04727 773 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 MRPL28Q13084 256 aaKnown RBP13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF672Q499Z4 452 aaPredicted RBP13.12□□□□□ -0.31
SNIP1-202ENST00000468040 TP53I3Q53FA7 332 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 LIPNQ5VXI9 398 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 RFPL4BQ6ZWI9 263 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF295-AS1Q8N0V1 137 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 KLHL36Q8N4N3 616 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 OR52H1Q8NGJ2 320 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 OR1J1Q8NGS3 322 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 OR52N1Q8NH53 320 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 C4orf36Q96KX1 117 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 CDCA4Q9BXL8 241 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 OR51B6Q9H340 312 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ZNF442Q9H7R0 627 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 MOB1AQ9H8S9 216 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 ERGIC3Q9Y282 383 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 R4GMQ9 66 aa13.12□□□□□ -0.31
SNIP1-202ENST00000468040 TMEM129A0AVI4 362 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 H3BSA7 217 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 J3QLW9 94 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 MYL12BO14950 172 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 MRPS14O60783 128 aaKnown RBP13.11□□□□□ -0.31
SNIP1-202ENST00000468040 PLAUP00749 431 aa13.11□□□□□ -0.31
SNIP1-202ENST00000468040 NGFP01138 241 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms