RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TRAV19A0A0A6YYK7 116 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 RPL36A-HNRNPH2H7BZ11 118 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 H7C417 338 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 EIF3HO15372 352 aaKnown RBP eCLIP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 CHST10O43529 356 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 CDH16O75309 829 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 FLOT1O75955 427 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 SLC22A5O76082 557 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 IL4P05112 153 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 DCNP07585 359 aaKnown RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 OR8U9P0C7N5 309 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 SYKP43405 635 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 CRISP1P54107 249 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 CDKN2DP55273 166 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 CRADDP78560 199 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 PITPNAQ00169 270 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 PIGHQ14442 188 aaPredicted RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 RCN1Q15293 331 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 TPTE2P1Q5T6R2 138 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 ZFP1Q6P2D0 407 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 BZW1Q7L1Q6 419 aaKnown RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 SSX9Q7RTT3 188 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 MRPL55Q7Z7F7 128 aaKnown RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 CBR4Q8N4T8 237 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 C11orf72Q8NBR9 251 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 OR11H7Q8NGC8 314 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 OR6Q1Q8NGQ2 317 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 OR9A2Q8NGT5 310 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 OR52P1PQ8NH57 321 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 ZNF488Q96MN9 340 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 GSDMAQ96QA5 445 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 MYCBPQ99417 103 aaPredicted RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 ZYG11BQ9C0D3 744 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 ACTR3CQ9C0K3 210 aaPredicted RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 EDA2RQ9HAV5 297 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 MED4Q9NPJ6 270 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 MTFP1Q9UDX5 166 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 MARCOQ9UEW3 520 aaPredicted RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 ENOPH1Q9UHY7 261 aa2.31□□□□□ -2.04
LRCH3-211ENST00000466054 TSSC4Q9Y5U2 329 aaPredicted RBP2.31□□□□□ -2.04
LRCH3-211ENST00000466054 NCBP2LA6PVI3 153 aaKnown RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 H0YJW9 148 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 K7EMT4 169 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 CD5P06127 495 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 ZNF14P17017 642 aaPredicted RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 IL1RNP18510 177 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 CELP19835 753 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 BCKDHBP21953 392 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 STOMP27105 288 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 OR1E1P30953 314 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 RBM34P42696 430 aaKnown RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 PRRX1P54821 245 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 RPS23P62266 143 aaKnown RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 MERTKQ12866 999 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 SNRNP35Q16560 246 aaKnown RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 ALKBH6Q3KRA9 238 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 MPV17L2Q567V2 206 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 DNLZQ5SXM8 178 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 C1orf185Q5T7R7 199 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 ADNP2Q6IQ32 1131 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 H3F3CQ6NXT2 135 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 LUZP2Q86TE4 346 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 MYOCDQ8IZQ8 938 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 GABRG1Q8N1C3 465 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 OSR2Q8N2R0 312 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 TTC29Q8NA56 475 aaPredicted RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 OR9G4Q8NGQ1 327 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 RTN4IP1Q8WWV3 396 aaPredicted RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 SLC25A46Q96AG3 418 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 RMI2Q96E14 147 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 COL21A1Q96P44 957 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 TBL1YQ9BQ87 522 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 SULT4A1Q9BR01 284 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 ULBP2Q9BZM5 246 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 GEMIN7Q9H840 131 aaKnown RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 EXOSC4Q9NPD3 245 aaKnown RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 FHOD3Q2V2M9 1422 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 COL27A1Q8IZC6 1860 aaPredicted RBP2.3□□□□□ -2.04
LRCH3-211ENST00000466054 DOCK8Q8NF50 2099 aa2.3□□□□□ -2.04
LRCH3-211ENST00000466054 IGKV1D-17A0A075B6S4 117 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 CENPVL3A0A0U1RRI6 287 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 KBTBD11-OT1A0A1B0GTJ5 212 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 A0A1B0GW55 424 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 PDZK1P1A8MUH7 402 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 NVLO15381 856 aaKnown RBP2.29□□□□□ -2.04
LRCH3-211ENST00000466054 HPRT1P00492 218 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 IGKV1-17P01599 117 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 DUX4L2P0CJ85 424 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 DUX4L3P0CJ86 424 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 DUX4L5P0CJ88 424 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 DUX4L6P0CJ89 424 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 DUX4L7P0CJ90 424 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 TNFSF9P41273 254 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 UQCRFS1P47985 274 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 CACNG7P62955 275 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 CDK5Q00535 292 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 BEX3Q00994 111 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 ART3Q13508 389 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 UNQ9165/PRO28630Q6UXU0 137 aa2.29□□□□□ -2.04
LRCH3-211ENST00000466054 CBLN2Q8IUK8 224 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms