RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 ZNF519Q8TB69 540 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 THAP6Q8TBB0 222 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 ADAMTS18Q8TE60 1221 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 SFT2D1Q8WV19 159 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 PIK3IP1Q96FE7 263 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 BMFQ96LC9 184 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 PHB2Q99623 299 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 CCDC3Q9BQI4 270 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 NUDT9Q9BW91 350 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 CST11Q9H112 138 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 S1PR5Q9H228 398 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 FBRSQ9HAH7 460 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 SEBOXQ9HB31 216 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 PRTFDC1Q9NRG1 225 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 MRPL22Q9NWU5 206 aaKnown RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 HRASLS2Q9NWW9 162 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 TAS2R4Q9NYW5 299 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 VSX1Q9NZR4 365 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 ZNF629Q9UEG4 869 aaPredicted RBP7.62□□□□□ -1.19
VPS50-208ENST00000458707 PRODH2Q9UF12 536 aa7.62□□□□□ -1.19
VPS50-208ENST00000458707 RP1P56715 2156 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 IGLV1-36A0A0B4J1U3 117 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 TEX13DA0A0J9YY54 714 aaPredicted RBP7.61□□□□□ -1.19
VPS50-208ENST00000458707 CPED1A4D0V7 1026 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 WIPF3A6NGB9 483 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 F5H0A9 414 aaPredicted RBP7.61□□□□□ -1.19
VPS50-208ENST00000458707 CCSO14618 274 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 EIF3GO75821 320 aaKnown RBP eCLIP7.61□□□□□ -1.19
VPS50-208ENST00000458707 IL33O95760 270 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 ISG15P05161 165 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 HEXAP06865 529 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 CTSBP07858 339 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 ZNF28P17035 718 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 LAP3P28838 519 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 GDI1P31150 447 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 RFC3P40938 356 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 SRSF5Q13243 272 aaKnown RBP7.61□□□□□ -1.19
VPS50-208ENST00000458707 GUCA2BQ16661 112 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 PRTGQ2VWP7 1150 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 ZNF528Q3MIS6 628 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 MOGAT2Q3SYC2 334 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 ZNF260Q3ZCT1 412 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 LRRC37A5PQ49AS3 106 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 BEX5Q5H9J7 111 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 PRAMEF17Q5VTA0 474 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 RAB12Q6IQ22 244 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 HAGHLQ6PII5 290 aaPredicted RBP7.61□□□□□ -1.19
VPS50-208ENST00000458707 MED25Q71SY5 747 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 SPRED2Q7Z698 418 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 ZNF584Q8IVC4 421 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 PAQR4Q8N4S7 273 aaPredicted RBP7.61□□□□□ -1.19
VPS50-208ENST00000458707 GATSQ8NAP1 163 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 KDF1Q8NAX2 398 aaPredicted RBP7.61□□□□□ -1.19
VPS50-208ENST00000458707 PHOSPHO1Q8TCT1 267 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 PPP1R14AQ96A00 147 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 SLC25A44Q96H78 314 aaPredicted RBP7.61□□□□□ -1.19
VPS50-208ENST00000458707 TMEM41AQ96HV5 264 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 SEC22AQ96IW7 307 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 GABRG3Q99928 467 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 PLA2G2FQ9BZM2 168 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 FAM60AQ9NP50 221 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 ASF1BQ9NVP2 202 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 MIOXQ9UGB7 285 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 MLXQ9UH92 298 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 ADAMTS9Q9P2N4 1935 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 CEP290O15078 2479 aa7.61□□□□□ -1.19
VPS50-208ENST00000458707 A0A0A6YYC8 382 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 PRSS37A4D1T9 235 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 LINC01553A4QN01 128 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 TMEM235A6NFC5 223 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 OR2AT4A6NND4 320 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 I3L1I5 382 aaPredicted RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 SCDO00767 359 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 XKRYO14609 159 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CIDEAO60543 219 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 DUS4LO95620 317 aaKnown RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 ACTL6AO96019 429 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 IGHMP01871 453 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CRHP06850 196 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 TPT1P13693 172 aaKnown RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 TBPP20226 339 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SLC6A8P48029 635 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CCR4P51679 360 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SEC13P55735 322 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 PPP1CAP62136 330 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SKP1P63208 163 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 CXADRP78310 365 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 ADAM8P78325 824 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 BTG2P78543 158 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 IL13RA1P78552 427 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SERTAD2Q14140 314 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 RNF212Q495C1 297 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SCGB2B2Q4G0G5 96 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 RNASE10Q5GAN6 216 aaKnown RBP7.6□□□□□ -1.19
VPS50-208ENST00000458707 TMEM196Q5HYL7 178 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 DRAM2Q6UX65 266 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 ETV3LQ6ZN32 361 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SLC35D2Q76EJ3 337 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 SSX9Q7RTT3 188 aa7.6□□□□□ -1.19
VPS50-208ENST00000458707 FJX1Q86VR8 437 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms