RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 MS4A18H0YCH9 400 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 AQP8O94778 261 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF205O95201 554 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PTTG1O95997 202 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PAK4O96013 591 aaPredicted RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 MATN1P21941 496 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 FBLP22087 321 aaKnown RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 KIR3DS1Q14943 382 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF528Q3MIS6 628 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 RBM48Q5RL73 367 aaKnown RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 AGAP6Q5VW22 663 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 OR4C11Q6IEV9 310 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 C17orf82Q86X59 251 aaPredicted RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TMEFF1Q8IYR6 380 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 C10orf111Q8N326 155 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 DHRSXQ8N5I4 330 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 IL22RA1Q8N6P7 574 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 APOBEC4Q8WW27 367 aaKnown RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TMEM239Q8WW34 195 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PTH2Q96A98 100 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TIMD4Q96H15 378 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 AGAP4Q96P64 663 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TSNAXQ99598 290 aaKnown RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ALG8Q9BVK2 526 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 EBPLQ9BY08 206 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 BCL2L10Q9HD36 194 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 DKKL1Q9UK85 242 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PILRAQ9UKJ1 303 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 WASF3Q9UPY6 502 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PSG11Q9UQ72 335 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ADAMTS20P59510 1910 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PPIAL4EA0A075B759 164 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 XPNPEP2O43895 674 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 RAD1O60671 282 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 GCM2O75603 506 aaPredicted RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 IGHV4-34P06331 123 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PPIAL4FP0DN26 164 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 DCTP40126 519 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 MAGEA5P43359 124 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 CRYBA2P53672 197 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 CD81P60033 236 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TFF2Q03403 129 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 CFHR1Q03591 330 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 C2orf80Q0P641 193 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ZNF181Q2M3W8 571 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PAN3Q58A45 887 aaKnown RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 RSBN1Q5VWQ0 802 aaPredicted RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 LYSMD4Q5XG99 296 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 KDM4DQ6B0I6 523 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ULK3Q6PHR2 472 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ENPP6Q6UWR7 440 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 C17orf107Q6ZR85 190 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 MEX3DQ86XN8 651 aaKnown RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 BCL6BQ8N143 479 aaPredicted RBP6.91□□□□□ -1.3
BRCC3-208ENST00000453705 OR5H6Q8NGV6 325 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 RPLP0P6Q8NHW5 317 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PIGXQ8TBF5 258 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ASB10Q8WXI3 467 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TMBIM1Q969X1 311 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 MS4A6EQ96DS6 147 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 IL17FQ96PD4 163 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PCGF1Q9BSM1 259 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 NDC1Q9BTX1 674 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 DOHHQ9BU89 302 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 FAIM2Q9BWQ8 316 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 GABARAPL3Q9BY60 117 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TMEM138Q9NPI0 162 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 B3GAT2Q9NPZ5 323 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 ACOXLQ9NUZ1 547 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 CES1P1Q9UKY3 287 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 TCF19Q9Y242 345 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 PPIAL4AQ9Y536 164 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 OR1A2Q9Y585 309 aa6.91□□□□□ -1.3
BRCC3-208ENST00000453705 A0A1B0GVI7 797 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 TVP23AA6NH52 213 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 SAGE2PA6NJ88 616 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 CENPXA8MT69 81 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 KCNK2O95069 426 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 SEMA4FO95754 770 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 SERPINA5P05154 406 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 IL3P08700 152 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 TRAPPC2P0DI81 140 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 TRAPPC2BP0DI82 140 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 NKX2-1P43699 371 aaPredicted RBP6.9□□□□□ -1.3
BRCC3-208ENST00000453705 VSX2P58304 361 aaPredicted RBP6.9□□□□□ -1.3
BRCC3-208ENST00000453705 STXBP1P61764 594 aaKnown RBP6.9□□□□□ -1.3
BRCC3-208ENST00000453705 SELENOWP63302 87 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 HBA1P69905 142 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 IKZF1Q13422 519 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 VAMP3Q15836 100 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 OR2T5Q6IEZ7 315 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 FAM180AQ6UWF9 173 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 RANBP3LQ86VV4 465 aaPredicted RBP6.9□□□□□ -1.3
BRCC3-208ENST00000453705 UBALD2Q8IYN6 164 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 CLECL1Q8IZS7 167 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 RNF175Q8N4F7 328 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 NECAP1Q8NC96 275 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 CCDC54Q8NEL0 328 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 OR2T29Q8NH02 315 aa6.9□□□□□ -1.3
BRCC3-208ENST00000453705 UBASH3BQ8TF42 649 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms