RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 SLC36A3Q495N2 470 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 SAMD4BQ5PRF9 694 aaKnown RBP11.53□□□□□ -0.56
TOM1-211ENST00000449508 LINC00346Q8IVM7 164 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 PGAM4Q8N0Y7 254 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 OR2AJ1Q8NGZ0 328 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 ZNF420Q8TAQ5 688 aaPredicted RBP11.53□□□□□ -0.56
TOM1-211ENST00000449508 MEGF10Q96KG7 1140 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 PITX2Q99697 317 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 RBM4Q9BWF3 364 aaKnown RBP11.53□□□□□ -0.56
TOM1-211ENST00000449508 WDR76Q9H967 626 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 CD300AQ9UGN4 299 aa11.53□□□□□ -0.56
TOM1-211ENST00000449508 IGHV3-64DA0A0J9YX35 117 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 TMEM89A2RUT3 159 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 F5H5K5 113 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 IFNL4K9M1U5 179 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 IDH3BO43837 385 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 ZNF205O95201 554 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 FSHBP01225 129 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 RRM2P31350 389 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 GSSP48637 474 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 SRP9P49458 86 aaKnown RBP11.52□□□□□ -0.57
TOM1-211ENST00000449508 MMP16P51512 607 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 ZNF154Q13106 437 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 ESCO2Q56NI9 601 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 SLC35F1Q5T1Q4 408 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 ZBTB46Q86UZ6 589 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 MUC20Q8N307 709 aaPredicted RBP11.52□□□□□ -0.57
TOM1-211ENST00000449508 BHLHE23Q8NDY6 225 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 DEFB108BQ8NET1 73 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 SDR9C7Q8NEX9 313 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 SLC26A10Q8NG04 563 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 GNPDA2Q8TDQ7 276 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 POP5Q969H6 163 aaKnown RBP11.52□□□□□ -0.57
TOM1-211ENST00000449508 SLC30A2Q9BRI3 323 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 HCAR1Q9BXC0 346 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 C1QTNF5Q9BXJ0 243 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 FN3KQ9H479 309 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 NTN4Q9HB63 628 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 IL1RAPQ9NPH3 570 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 TMEM100Q9NV29 134 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 POLR3KQ9Y2Y1 108 aaPredicted RBP11.52□□□□□ -0.57
TOM1-211ENST00000449508 AUP1Q9Y679 476 aa11.52□□□□□ -0.57
TOM1-211ENST00000449508 OR6C68A6NDL8 312 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 IQCF6A8MYZ5 107 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 F5H0A9 414 aaPredicted RBP11.51□□□□□ -0.57
TOM1-211ENST00000449508 F5H5P2 479 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 ARPC2O15144 300 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 MLNRO43193 412 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 CYB5R3P00387 301 aaPredicted RBP11.51□□□□□ -0.57
TOM1-211ENST00000449508 LCATP04180 440 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 WNT2P09544 360 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 SELEP16581 610 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 COMPP49747 757 aaPredicted RBP11.51□□□□□ -0.57
TOM1-211ENST00000449508 MXRA7P84157 204 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 TSPAN31Q12999 210 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 ECH1Q13011 328 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 ARMCX4Q5H9R4 360 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 SLC18B1Q6NT16 456 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 RBMS3Q6XE24 437 aaKnown RBP11.51□□□□□ -0.57
TOM1-211ENST00000449508 CFAP77Q6ZQR2 320 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 COLCA1Q6ZS62 124 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 NAA40Q86UY6 237 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 ZDHHC21Q8IVQ6 265 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 C3orf56Q8N813 242 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 ZDHHC22Q8N966 263 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 OR52E2Q8NGJ4 325 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 DVL3Q92997 716 aaPredicted RBP11.51□□□□□ -0.57
TOM1-211ENST00000449508 MRI1Q9BV20 369 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 TMEM165Q9HC07 324 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 DDX28Q9NUL7 540 aaKnown RBP11.51□□□□□ -0.57
TOM1-211ENST00000449508 ARL8BQ9NVJ2 186 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 CYB5R1Q9UHQ9 305 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 TAGLN3Q9UI15 199 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 INSIG2Q9Y5U4 225 aa11.51□□□□□ -0.57
TOM1-211ENST00000449508 LRRC30A6NM36 301 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 CEACAM18A8MTB9 384 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 A8MXK9 166 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 HLA-DPB1P04440 258 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 ACSM4P0C7M7 580 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 ZNF823P16415 610 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 ZNF12P17014 697 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 PRSS12P56730 875 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.5□□□□□ -0.57
TOM1-211ENST00000449508 MALLQ13021 153 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 GK2Q14410 553 aaPredicted RBP11.5□□□□□ -0.57
TOM1-211ENST00000449508 CLEC12AQ5QGZ9 265 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 PGBD2Q6P3X8 592 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 C16orf89Q6UX73 402 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 MOGAT3Q86VF5 341 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 DEFB107AQ8IZN7 70 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 SLCO4A1Q96BD0 722 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 ATF6BQ99941 703 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 EGLN3Q9H6Z9 239 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 MIOXQ9UGB7 285 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 OR5V1Q9UGF6 321 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 LRCH1Q9Y2L9 728 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 PPIAL4AQ9Y536 164 aa11.5□□□□□ -0.57
TOM1-211ENST00000449508 KRT36O76013 467 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms