RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 GGTLC1Q9BX51 225 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 GUCA1BQ9UMX6 200 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 VSIG4Q9Y279 399 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 TNXBP22105 4242 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 I3L521 148 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 LYPD3O95274 346 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 HTR5AP47898 357 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 IDH2P48735 452 aaKnown RBP4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 MARCKSL1P49006 195 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC12A2P55011 1212 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 BASP1P80723 227 aaKnown RBP4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 PABPC1L2AQ5JQF8 200 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 C10orf128Q5T292 105 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 WBP2NLQ6ICG8 309 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 PXKQ7Z7A4 578 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 ANKRD13BQ86YJ7 626 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 C6orf223Q8N319 242 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 OR52L1Q8NGH7 329 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 OR13C5Q8NGS8 318 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 FGFBP3Q8TAT2 258 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 DCUN1D4Q92564 292 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 CREB3L1Q96BA8 519 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 CMBLQ96DG6 245 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 SDF2Q99470 211 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 HHLA2Q9UM44 414 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 FAF1Q9UNN5 650 aaPredicted RBP4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 FAM95CA0A1B0GW59 222 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 A0A1W2PRD5 423 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 A0A1W2PRF3 423 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 A0A1W2PRM7 423 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 GMDSO60547 372 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 IFNB1P01574 187 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 ANOS1P23352 680 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 SDHAP31040 664 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 GABPB1Q06547 395 aaPredicted RBP4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 NDUFAF6Q330K2 333 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 ABCA11PQ4W5N1 156 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 C10orf99Q6UWK7 81 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 GOLGA7Q7Z5G4 137 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 MYLK4Q86YV6 388 aaPredicted RBP4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 CDS1Q92903 461 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 FLYWCH2Q96CP2 140 aaKnown RBP4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 CERS2Q96G23 380 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 FAM46AQ96IP4 442 aaKnown RBP4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 UBXN10Q96LJ8 280 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 CCDC140Q96MF4 163 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 BARHL1Q9BZE3 327 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 PPCSQ9HAB8 311 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 EQTNQ9NQ60 294 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 GPATCH2Q9NW75 528 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 RNF11Q9Y3C5 154 aa4.79□□□□□ -1.64
BRAFP1-201ENST00000445336 C5orf49A4QMS7 147 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 RRP9O43818 475 aaKnown RBP4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 SCN2BO60939 215 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 FCN3O75636 299 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 UGT2B17O75795 530 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 CST2P09228 141 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 RAE1P78406 368 aaKnown RBP4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 ICAM4Q14773 271 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 OR4D1Q15615 310 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 MICBQ29980 383 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 ACSM2BQ68CK6 577 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 UBL4BQ8N7F7 174 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 ANKRD49Q8WVL7 239 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 TSSK3Q96PN8 268 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 SEPHS2Q99611 448 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 ALX4Q9H161 411 aaPredicted RBP4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 RHOJQ9H4E5 214 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 ZDHHC9Q9Y397 364 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 GNG14A0A1W2PPG7 69 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 A0A1W2PQ09 198 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 HTR3EA5X5Y0 456 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 LINC01619G3V211 115 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC28A1O00337 649 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 AKAP10O43572 662 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 AMY1AP04745 511 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 AMY2AP04746 511 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 RPS4Y1P22090 263 aaKnown RBP4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 NAA10P41227 235 aaPredicted RBP4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 SPATA46Q5T0L3 261 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 FAM69AQ5T7M9 428 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 ZC3HC1Q86WB0 502 aaKnown RBP4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 FNDC8Q8TC99 324 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 NDEL1Q9GZM8 345 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC2A8Q9NY64 477 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 KIAA1456Q9P272 454 aa4.78□□□□□ -1.64
BRAFP1-201ENST00000445336 ZC3H12DA2A288 527 aaKnown RBP4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 STX16-NPEPL1H3BU86 382 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 STX16O14662 325 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 SPRY2O43597 315 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 RGS11O94810 467 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 KRT6AP02538 564 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 KRT6BP04259 564 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 UBTFL6P0CB48 400 aaPredicted RBP4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 NAT1P18440 290 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 RPL3P39023 403 aaKnown RBP4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 ARL1P40616 181 aaPredicted RBP4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 KRT6CP48668 564 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 ERVK-25P63136 954 aa4.77□□□□□ -1.65
BRAFP1-201ENST00000445336 CFHR3Q02985 330 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms