RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 HOXB4P17483 251 aaPredicted RBP14.9□□□□□ -0.02
LIME1-202ENST00000444951 CRHBPP24387 322 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 CD40P25942 277 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 HSD11B1P28845 292 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 PRKXP51817 358 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 TP53I3Q53FA7 332 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 PAQR4Q8N4S7 273 aaPredicted RBP14.9□□□□□ -0.02
LIME1-202ENST00000444951 FAM169BQ8N8A8 192 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 RNF133Q8WVZ7 376 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 MYDGFQ969H8 173 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 COQ7Q99807 217 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 CCDC90BQ9GZT6 254 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 ESRP2Q9H6T0 727 aaKnown RBP14.9□□□□□ -0.02
LIME1-202ENST00000444951 ELOVL3Q9HB03 270 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 LRCH1Q9Y2L9 728 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 GRIP1Q9Y3R0 1128 aa14.9□□□□□ -0.02
LIME1-202ENST00000444951 J3QLW9 94 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 ABCD4O14678 606 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 IGHA1P01876 353 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 PIPP12273 146 aaPredicted RBP14.89□□□□□ -0.03
LIME1-202ENST00000444951 ZNF19P17023 458 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 MYL12AP19105 171 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 PAX7P23759 505 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 PTAFRP25105 342 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 DCKP27707 260 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 C21orf33P30042 268 aaPredicted RBP14.89□□□□□ -0.03
LIME1-202ENST00000444951 CALCRP30988 508 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 OPRL1P41146 370 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 SLC6A9P48067 706 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 ETV1P50549 477 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 NAAAQ02083 359 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 ECH1Q13011 328 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 BEX5Q5H9J7 111 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 C1QTNF12Q5T7M4 302 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 PLEKHG7Q6ZR37 379 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 ZNF283Q8N7M2 679 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 YIPF7Q8N8F6 280 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 OR1J2Q8NGS2 313 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 SPTSSAQ969W0 71 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 MBD6Q96DN6 1003 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 POM121L2Q96KW2 1035 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 OR8B4Q96RC9 309 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 ALG8Q9BVK2 526 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 MROQ9BYG7 248 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 BRD7Q9NPI1 651 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 CHCHD3Q9NX63 227 aaKnown RBP14.89□□□□□ -0.03
LIME1-202ENST00000444951 ERVK13-1Q9NX77 482 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 CLEC2DQ9UHP7 191 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 GNG8Q9UK08 70 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 BLOC1S6Q9UL45 172 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 DIMT1Q9UNQ2 313 aaKnown RBP14.89□□□□□ -0.03
LIME1-202ENST00000444951 LRP12Q9Y561 859 aa14.89□□□□□ -0.03
LIME1-202ENST00000444951 IGHV2OR16-5A0A0B4J2B6 119 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 ATP6V1G2-DDX39BF2Z307 99 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 SIAH2O43255 324 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 RGS10O43665 173 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 RPP14O95059 124 aaKnown RBP14.88□□□□□ -0.03
LIME1-202ENST00000444951 CRYAAP02489 173 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 KRT8P05787 483 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 CDK1P06493 297 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 CD3EP07766 207 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 FAM157BP0CG42 384 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 COX5BP10606 129 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 GRB2P62993 217 aaKnown RBP14.88□□□□□ -0.03
LIME1-202ENST00000444951 KRTAP21-3Q3LHN1 58 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 NCMAPQ5T1S8 102 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 ADAM5Q6NVV9 412 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 SLC22A25Q6T423 547 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 NAA40Q86UY6 237 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 WFDC11Q8NEX6 87 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 IPCEF1Q8WWN9 437 aaPredicted RBP14.88□□□□□ -0.03
LIME1-202ENST00000444951 KCNJ15Q99712 375 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 DDX28Q9NUL7 540 aaKnown RBP14.88□□□□□ -0.03
LIME1-202ENST00000444951 FKBP14Q9NWM8 211 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 MRM2Q9UI43 246 aaKnown RBP14.88□□□□□ -0.03
LIME1-202ENST00000444951 GTF2A1LQ9UNN4 478 aa14.88□□□□□ -0.03
LIME1-202ENST00000444951 EXOSC1Q9Y3B2 195 aaKnown RBP14.88□□□□□ -0.03
LIME1-202ENST00000444951 PRR14LQ5THK1 2151 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 METTL15A6NJ78 407 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 DEFB108AA8MXU0 73 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 M0R135 149 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 ABHD16AO95870 558 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 MT-ND2P03891 347 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 RAF1P04049 648 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 LIMS3P0CW19 117 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 LIMS4P0CW20 117 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 SLC2A1P11166 492 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 CX3CR1P49238 355 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 RIDAP52758 137 aaKnown RBP14.87□□□□□ -0.03
LIME1-202ENST00000444951 CDH15P55291 814 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 TPTEP56180 551 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 OR12D2P58182 307 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 SLC35A2P78381 396 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 HGFACQ04756 655 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 EGR3Q06889 387 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 GALEQ14376 348 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 RSPO1Q2MKA7 263 aaPredicted RBP14.87□□□□□ -0.03
LIME1-202ENST00000444951 DEFB113Q30KQ7 82 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 C3orf36Q3SXR2 165 aa14.87□□□□□ -0.03
LIME1-202ENST00000444951 FAM220AQ7Z4H9 259 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms