RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 AKIRIN1Q9H9L7 192 aaPredicted RBP14.23□□□□□ -0.13
SHQ1-202ENST00000444040 MYOZ1Q9NP98 299 aaPredicted RBP14.23□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF736B4DX44 427 aaPredicted RBP14.22□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF814B7Z6K7 855 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 SYT7O43581 403 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 TRAF3IP2O43734 574 aaPredicted RBP14.22□□□□□ -0.13
SHQ1-202ENST00000444040 S100A11P31949 105 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 SFRP5Q5T4F7 317 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 RFPL4BQ6ZWI9 263 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 NOXO1Q8NFA2 376 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 OR1M1Q8NGA1 313 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 OR13C8Q8NGS7 320 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 CCDC107Q8WV48 283 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 CCDC74BQ96LY2 380 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 B3GNT4Q9C0J1 378 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 A0A1B0GTI1 187 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 A0A1W2PNR3 127 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 SIGLEC6O43699 453 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF250P15622 560 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 AANATQ16613 207 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 ATPAF1Q5TC12 328 aaPredicted RBP14.22□□□□□ -0.13
SHQ1-202ENST00000444040 PTCRAQ6ISU1 281 aaPredicted RBP14.22□□□□□ -0.13
SHQ1-202ENST00000444040 SAP25Q8TEE9 199 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 C17orf50Q8WW18 174 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 WBP1Q96G27 269 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 RASL10BQ96S79 203 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 SLC26A1Q9H2B4 701 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 KIF25Q9UIL4 384 aa14.22□□□□□ -0.13
SHQ1-202ENST00000444040 TMA7Q9Y2S6 64 aaKnown RBP14.22□□□□□ -0.13
SHQ1-202ENST00000444040 METTL21EPA6NDL7 271 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 I3L521 148 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 ZNF28P17035 718 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 GNALP38405 381 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 LY6G6FQ5SQ64 297 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 RAB12Q6IQ22 244 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 TMUB2Q71RG4 321 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 BPIFB2Q8N4F0 458 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 SLC6A7Q99884 636 aa14.21□□□□□ -0.13
SHQ1-202ENST00000444040 IGHG1P01857 330 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 VSIG8P0DPA2 414 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 CLRN1P58418 232 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 PHF19Q5T6S3 580 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 MRPL14Q6P1L8 145 aaKnown RBP14.21□□□□□ -0.14
SHQ1-202ENST00000444040 SLC22A24Q8N4F4 322 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 WDSUB1Q8N9V3 476 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 OR4S1Q8NGB4 309 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 SLC22A8Q8TCC7 542 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 ASB13Q8WXK3 278 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 NKD1Q969G9 470 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 SPACA9Q96E40 222 aaPredicted RBP14.21□□□□□ -0.14
SHQ1-202ENST00000444040 UQCC2Q9BRT2 126 aa14.21□□□□□ -0.14
SHQ1-202ENST00000444040 ASCC3Q8N3C0 2202 aaKnown RBP14.21□□□□□ -0.14
SHQ1-202ENST00000444040 OR14I1A6ND48 311 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 POU3F2P20265 443 aaPredicted RBP14.2□□□□□ -0.14
SHQ1-202ENST00000444040 B3GNTL1Q67FW5 361 aaPredicted RBP14.2□□□□□ -0.14
SHQ1-202ENST00000444040 SIGIRRQ6IA17 410 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 SLC25A47Q6Q0C1 308 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 CHMP1BQ7LBR1 199 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 PPP1R3BQ86XI6 285 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 C12orf45Q8N5I9 185 aaPredicted RBP14.2□□□□□ -0.14
SHQ1-202ENST00000444040 CMBLQ96DG6 245 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 OR5B2Q96R09 309 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 FXYD6-FXYD2A0A087WZ82 144 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 RAMP1O60894 148 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 BPNT1O95861 308 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 CDAP32320 146 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 TMED4Q7Z7H5 227 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 GPAT4Q86UL3 456 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 FJX1Q86VR8 437 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF584Q8IVC4 421 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 FADS6Q8N9I5 356 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 OR5D14Q8NGL3 314 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 OR13C9Q8NGT0 318 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 FXYD6Q9H0Q3 95 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 SEC61A2Q9H9S3 476 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 FSCN3Q9NQT6 498 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 SLC2A8Q9NY64 477 aa14.2□□□□□ -0.14
SHQ1-202ENST00000444040 C19orf25Q9UFG5 118 aaPredicted RBP14.2□□□□□ -0.14
SHQ1-202ENST00000444040 FARSAQ9Y285 508 aaKnown RBP14.2□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF878C9JN71 531 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 CACNA1EQ15878 2313 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 ZNF239Q16600 458 aaKnown RBP14.19□□□□□ -0.14
SHQ1-202ENST00000444040 LYSMD4Q5XG99 296 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 C11orf88Q6PI97 169 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 RHOUQ7L0Q8 258 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 OR6X1Q8NH79 312 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 OR51E1Q8TCB6 317 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 ELP5Q8TE02 316 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 FAM46BQ96A09 425 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 DEFB126Q9BYW3 111 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 OCIAD1Q9NX40 245 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 KCNN3Q9UGI6 736 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 SLC5A6Q9Y289 635 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 B3GALNT1O75752 331 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 RAB3AP20336 220 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 ANOS1P23352 680 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 DHPSP49366 369 aaPredicted RBP14.19□□□□□ -0.14
SHQ1-202ENST00000444040 HIST3H3Q16695 136 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 CDNFQ49AH0 187 aa14.19□□□□□ -0.14
SHQ1-202ENST00000444040 EDAQ92838 391 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms