RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EMC6Q9BV81 110 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 NMNAT2Q9BZQ4 307 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 TXNIPQ9H3M7 391 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 AMBNQ9NP70 447 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 FKBP14Q9NWM8 211 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 IMPAD1Q9NX62 359 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 ERVK-18Q9QC07 812 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 BAIAP2Q9UQB8 552 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 B3GALT5Q9Y2C3 310 aa4.14□□□□□ -1.75
PTPN4-206ENST00000441089 EPPK1P58107 5090 aaKnown RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 LOC102725191A0A1B0GVB3 256 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 NPIPB13A6NJU9 1138 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 TRIM64CA6NLI5 447 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 NPIPB4C9JG80 1138 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PIN1P1O15428 100 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 DNPH1O43598 174 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 IDH3BO43837 385 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CYTIPO60759 359 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 TRMUO75648 421 aaKnown RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 OR6A2O95222 327 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 APOL3O95236 402 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 GPANK1O95872 356 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 TGM6O95932 706 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 ACTL6AO96019 429 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PLAUP00749 431 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 MT-ND2P03891 347 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 GYPBP06028 91 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CCDC159P0C7I6 412 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 DBTP11182 482 aaKnown RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PSKH1P11801 424 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CPN1P15169 458 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CCKARP32238 428 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PYCR1P32322 319 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 SLC25A1P53007 311 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CDH11P55287 796 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 BIDP55957 195 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 HILS1P60008 231 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CXCR4P61073 352 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CSNK2A1P68400 391 aaPredicted RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 SLC35A2P78381 396 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 ROM1Q03395 351 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 FMODQ06828 376 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 LGALS3BPQ08380 585 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 FAPQ12884 760 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 APOFQ13790 326 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PON3Q15166 354 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 KCTD21Q4G0X4 260 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 RBM48Q5RL73 367 aaKnown RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PHYHD1Q5SRE7 291 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 LINC01590Q5TEZ4 76 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 NXNL2Q5VZ03 156 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 OTPQ5XKR4 325 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 GPR139Q6DWJ6 353 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 OR2A2Q6IF42 318 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 NIPAL3Q6P499 406 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 LEG1Q6P5S2 330 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CASP12Q6UXS9 341 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CREB3L2Q70SY1 520 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 SLC35D2Q76EJ3 337 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 FCRLAQ7L513 359 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 SHFQ7M4L6 423 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PXKQ7Z7A4 578 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 ADGRE4PQ86SQ3 457 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 UEVLDQ8IX04 471 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 GCNT2Q8N0V5 402 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 OR6V1Q8N148 313 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 OR9K2Q8NGE7 335 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 OR14K1Q8NGZ2 314 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 FNDC9Q8TBE3 224 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 RNF128Q8TEB7 428 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 ABHD3Q8WU67 409 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 TRUB1Q8WWH5 349 aaKnown RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 LGALS12Q96DT0 336 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 DTNBP1Q96EV8 351 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 OXGR1Q96P68 337 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 SLC38A2Q96QD8 506 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 NAA11Q9BSU3 229 aaPredicted RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 MRPL13Q9BYD1 178 aaKnown RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 SYT4Q9H2B2 425 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 DUSP21Q9H596 190 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 FN3KRPQ9HA64 309 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PLCXD1Q9NUJ7 323 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CLN6Q9NWW5 311 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 ASB6Q9NWX5 421 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 TAS2R16Q9NYV7 291 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 VSX1Q9NZR4 365 aaPredicted RBP4.13□□□□□ -1.75
PTPN4-206ENST00000441089 CLCF1Q9UBD9 225 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 GRHPRQ9UBQ7 328 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 PSORS1C1Q9UIG5 152 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 KLHL21Q9UJP4 597 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 RASD1Q9Y272 281 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 RNF115Q9Y4L5 304 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 FLVCR1Q9Y5Y0 555 aa4.13□□□□□ -1.75
PTPN4-206ENST00000441089 IGKV3D-15A0A087WSY6 115 aa4.12□□□□□ -1.75
PTPN4-206ENST00000441089 IGLV1-36A0A0B4J1U3 117 aa4.12□□□□□ -1.75
PTPN4-206ENST00000441089 A0A1W2PRG6 482 aa4.12□□□□□ -1.75
PTPN4-206ENST00000441089 SLC22A23A1A5C7 686 aa4.12□□□□□ -1.75
PTPN4-206ENST00000441089 PRSS37A4D1T9 235 aa4.12□□□□□ -1.75
PTPN4-206ENST00000441089 MAGEA13PA6NCF6 341 aa4.12□□□□□ -1.75
PTPN4-206ENST00000441089 RIIAD1A6NNX1 92 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms