RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 MAP3K8P41279 467 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 IL13RA1P78552 427 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 RASGEF1BQ0VAM2 473 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 PNLIPRP3Q17RR3 467 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 FAM166AQ6J272 317 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 DRAM2Q6UX65 266 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 TAF8Q7Z7C8 310 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CD163Q86VB7 1156 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CASTOR1Q8WTX7 329 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 TSACCQ96A04 125 aaPredicted RBP7.68□□□□□ -1.18
HPS4-206ENST00000439453 SLC41A2Q96JW4 573 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 SERINC2Q96SA4 455 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 SEC61A2Q9H9S3 476 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 LPAR3Q9UBY5 353 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 KLK13Q9UKR3 277 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 ZZEF1O43149 2961 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 DCDC2BA2VCK2 349 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 C5orf51A6NDU8 294 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 RNASEK-C17orf49H0YIS7 233 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 FOSL1P15407 271 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CAV2P51636 162 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 PLPP7Q8NBV4 271 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 OR4S1Q8NGB4 309 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 OR4E2Q8NGC2 313 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 OR6N2Q8NGY6 317 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CCL4L1Q8NHW4 92 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 NUDCD2Q8WVJ2 157 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 HIST1H2BAQ96A08 127 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 FBXO17Q96EF6 278 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 C4orf45Q96LM5 186 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 DCBLD2Q96PD2 775 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 CLCC1Q96S66 551 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 ZMAT3Q9HA38 289 aaKnown RBP7.68□□□□□ -1.18
HPS4-206ENST00000439453 ZNF107Q9UII5 783 aaPredicted RBP7.68□□□□□ -1.18
HPS4-206ENST00000439453 DAPP1Q9UN19 280 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 RPH3AQ9Y2J0 694 aaPredicted RBP7.68□□□□□ -1.18
HPS4-206ENST00000439453 TMED7Q9Y3B3 224 aa7.68□□□□□ -1.18
HPS4-206ENST00000439453 ASXL3Q9C0F0 2248 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 A0A1W2PPE3 182 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 PRSS38A1L453 326 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 EFCAB7A8K855 629 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 B3GALT2O43825 422 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 NDUFS6O75380 124 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 HTR3BO95264 441 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 APEHP13798 732 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 RPS27P42677 84 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 F2RL1P55085 397 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 PRPS1P60891 318 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 FABP9Q0Z7S8 132 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 MEF2DQ14814 521 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ELAVL1Q15717 326 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 WDR38Q5JTN6 314 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 PAPD4Q6PIY7 484 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 RRNAD1Q96FB5 475 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 WDR92Q96MX6 357 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 PRRT1Q99946 306 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 RNF126Q9BV68 326 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 METTL1Q9UBP6 276 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 PCDHGA1Q9Y5H4 931 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 SLC22A7Q9Y694 548 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 A0A087WUJ7 227 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 TRBV6-7A0A0A0MS04 114 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 C13orf42A0A1B0GVH6 325 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 BLOC1S5-TXNDC5H3BN57 136 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 DCTN6O00399 190 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 EIF1AYO14602 144 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 TXNL1O43396 289 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 DOK2O60496 412 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 CT62P0C5K7 136 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 TACR3P29371 465 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 EIF1AXP47813 144 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 RPS4XP62701 263 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 ADAM8P78325 824 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 RNF212Q495C1 297 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 SLC29A4Q7RTT9 530 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ZNF550Q7Z398 422 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ZNF584Q8IVC4 421 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 SHISA5Q8N114 240 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ZNF561Q8N587 486 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 DEFB124Q8NES8 71 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 NT5CQ8TCD5 201 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 GPX7Q96SL4 187 aaPredicted RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 WDR76Q9H967 626 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 PMS2P1A4D2B8 440 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ZNF860A6NHJ4 632 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 TNFRSF10CO14798 259 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 FGF17O60258 216 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ALOX5APP20292 161 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 VAMP1P23763 118 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 RPS15AP62244 130 aaKnown RBP7.67□□□□□ -1.18
HPS4-206ENST00000439453 EGR3Q06889 387 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 PMPCAQ10713 525 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 PRICKLE4Q2TBC4 344 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 CDNFQ49AH0 187 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ASPHD2Q6ICH7 369 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 OR10K2Q6IF99 312 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ETV3LQ6ZN32 361 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 DPY19L4Q7Z388 723 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 ZDHHC22Q8N966 263 aa7.67□□□□□ -1.18
HPS4-206ENST00000439453 THRSPQ92748 146 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms