RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 F5H5K5 113 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 EBAG9O00559 213 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 SPRY3O43610 288 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 PRKYO43930 277 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 SELENOFO60613 162 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 CDC14BO60729 498 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 SPARCP09486 303 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF823P16415 610 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF23P17027 643 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 KITLGP21583 273 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 USF1P22415 310 aaPredicted RBP11.28□□□□□ -0.6
LINC00399-201ENST00000439008 GCH1P30793 250 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
LINC00399-201ENST00000439008 ENTPD1P49961 510 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF81P51508 661 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 EFNB1P98172 346 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 GGTLC2Q14390 218 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 TSTQ16762 297 aaKnown RBP11.28□□□□□ -0.6
LINC00399-201ENST00000439008 TMEM249Q2WGJ8 235 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 TEX30Q5JUR7 227 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 SPATC1Q76KD6 591 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 DPY19L4Q7Z388 723 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 HIPK1Q86Z02 1210 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 OTULINQ96BN8 352 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 HAVCR1Q96D42 359 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 CENPNQ96H22 339 aaPredicted RBP11.28□□□□□ -0.6
LINC00399-201ENST00000439008 CIB1Q99828 191 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 CDADC1Q9BWV3 514 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 C1QTNF5Q9BXJ0 243 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF275Q9NSD4 429 aaPredicted RBP11.28□□□□□ -0.6
LINC00399-201ENST00000439008 DDX28Q9NUL7 540 aaKnown RBP11.28□□□□□ -0.6
LINC00399-201ENST00000439008 DCAF16Q9NXF7 216 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 NKIRAS2Q9NYR9 191 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 TVP23BQ9NYZ1 205 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 OAZ3Q9UMX2 235 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 KLHDC2Q9Y2U9 406 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 DYSFO75923 2080 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 CCDC182A6NF36 153 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 ZAR1LA6NP61 321 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 PRR23D1E9PI22 279 aaPredicted RBP11.27□□□□□ -0.61
LINC00399-201ENST00000439008 H3BSA7 217 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 NDUFS8O00217 210 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 GLCEO94923 617 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 HMGN1P05114 100 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 PRR23D2P0DMB1 279 aaPredicted RBP11.27□□□□□ -0.61
LINC00399-201ENST00000439008 IGHV4-31P0DP07 118 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 GSTT1P30711 240 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 ARHGDIAP52565 204 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 HCCSP53701 268 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 SELENOVP59797 346 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 PPP2R2BQ00005 443 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 SNAI3Q3KNW1 292 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 OR2T2Q6IF00 324 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 ARL9Q6T311 187 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 FBXW12Q6X9E4 464 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 ERI1Q8IV48 349 aaKnown RBP11.27□□□□□ -0.61
LINC00399-201ENST00000439008 OR5AS1Q8N127 324 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 APOBEC3DQ96AK3 386 aaPredicted RBP11.27□□□□□ -0.61
LINC00399-201ENST00000439008 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 DCLRE1CQ96SD1 692 aaKnown RBP11.27□□□□□ -0.61
LINC00399-201ENST00000439008 PIMREGQ9BSJ6 248 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 ABHD6Q9BV23 337 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.61
LINC00399-201ENST00000439008 KRT84Q9NSB2 600 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 TREM2Q9NZC2 230 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 KIF17Q9P2E2 1029 aa11.27□□□□□ -0.61
LINC00399-201ENST00000439008 PRR32B1ATL7 298 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 M0R135 149 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 CD5LO43866 347 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 TIMM8AO60220 97 aaPredicted RBP11.26□□□□□ -0.61
LINC00399-201ENST00000439008 ADH4P08319 380 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 TACSTD2P09758 323 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 SLC2A1P11166 492 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 RAC2P15153 192 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 PRKXP51817 358 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 ESRRGP62508 458 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 ECH1Q13011 328 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 CDK5R2Q13319 367 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 GK2Q14410 553 aaPredicted RBP11.26□□□□□ -0.61
LINC00399-201ENST00000439008 KLHL12Q53G59 568 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 SLX4IPQ5VYV7 408 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 C12orf73Q69YU5 71 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 USP51Q70EK9 711 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 CXXC5Q7LFL8 322 aaKnown RBP11.26□□□□□ -0.61
LINC00399-201ENST00000439008 ZDHHC13Q8IUH4 622 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 OR6N2Q8NGY6 317 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 SNX33Q8WV41 574 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 DNAJC9Q8WXX5 260 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 RDH5Q92781 318 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 ZNF799Q96GE5 643 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 POM121Q96HA1 1249 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 INTS14Q96SY0 518 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 OSBPL10Q9BXB5 764 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 ARHGAP32A7KAX9 2087 aa11.26□□□□□ -0.61
LINC00399-201ENST00000439008 H0YL77 283 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 LCATP04180 440 aa11.25□□□□□ -0.61
LINC00399-201ENST00000439008 ERCC1P07992 297 aaPredicted RBP11.25□□□□□ -0.61
LINC00399-201ENST00000439008 FCGR1AP12314 374 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms