RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 GFRA3O60609 400 aa18.6■□□□□ 0.57
PTPRF-207ENST00000436724 SLC19A2O60779 497 aa18.6■□□□□ 0.57
PTPRF-207ENST00000436724 EIF4EP06730 217 aaKnown RBP18.6■□□□□ 0.57
PTPRF-207ENST00000436724 SLC2A1P11166 492 aa18.6■□□□□ 0.57
PTPRF-207ENST00000436724 LSM6P62312 80 aaKnown RBP18.6■□□□□ 0.57
PTPRF-207ENST00000436724 ASPHD2Q6ICH7 369 aa18.6■□□□□ 0.57
PTPRF-207ENST00000436724 KLHL24Q6TFL4 600 aa18.6■□□□□ 0.57
PTPRF-207ENST00000436724 DUSP18Q8NEJ0 188 aa18.6■□□□□ 0.57
PTPRF-207ENST00000436724 ASB5Q8WWX0 329 aa18.6■□□□□ 0.57
PTPRF-207ENST00000436724 TRGV5A0A0B4J1U4 118 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 LOC107986453A0A1B0GWG9 222 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 HSD11B1P28845 292 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 ZNF84P51523 738 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 TAF13Q15543 124 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 BCL2L15Q5TBC7 163 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 TUSC5Q8IXB3 177 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 GPR137CQ8N3F9 429 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 RANGRFQ9HD47 186 aaPredicted RBP18.59■□□□□ 0.57
PTPRF-207ENST00000436724 SLC5A6Q9Y289 635 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 APC2O95996 2303 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 P2RY10O00398 339 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 ZNHIT1O43257 154 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 LMX1BO60663 402 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 SYNGR4O95473 234 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 HLA-DMAP28067 261 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 CLDN12P56749 244 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 GALK2Q01415 458 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 PLET1Q6UQ28 207 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 LRRTM1Q86UE6 522 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 RNF170Q96K19 258 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 FYTTD1Q96QD9 318 aaKnown RBP18.59■□□□□ 0.57
PTPRF-207ENST00000436724 ADAM30Q9UKF2 790 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 MCTS1Q9ULC4 181 aaKnown RBP18.59■□□□□ 0.57
PTPRF-207ENST00000436724 DHDHQ9UQ10 334 aa18.59■□□□□ 0.57
PTPRF-207ENST00000436724 NOSIPQ9Y314 301 aaKnown RBP18.59■□□□□ 0.57
PTPRF-207ENST00000436724 IFITM5A6NNB3 132 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 LYRM1O43325 122 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 CEACAM4O75871 244 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 ACTL6AO96019 429 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 TTRP02766 147 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 RAF1P04049 648 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 MZT2BQ6NZ67 158 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 FBXO17Q96EF6 278 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 PRRG4Q9BZD6 226 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 PBOV1Q9GZY1 135 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 SLITRK2Q9H156 845 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 CALHM2Q9HA72 323 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 EXTL2Q9UBQ6 330 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 V9GY05 133 aa18.58■□□□□ 0.57
PTPRF-207ENST00000436724 ATMQ13315 3056 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 IGKV3D-15A0A087WSY6 115 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 PDCD5O14737 125 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 B4GALT1P15291 398 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 ZNF24P17028 368 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 UBASH3BQ8TF42 649 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 SCNM1Q9BWG6 230 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 CYSLTR2Q9NS75 346 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 HHLA2Q9UM44 414 aa18.58■□□□□ 0.56
PTPRF-207ENST00000436724 A0A0G2JMP0 313 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 A0A0X1KG70 313 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 MRPL33O75394 65 aaKnown RBP18.57■□□□□ 0.56
PTPRF-207ENST00000436724 ACSM4P0C7M7 580 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 DCTDP32321 178 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 MRPS34P82930 218 aaKnown RBP18.57■□□□□ 0.56
PTPRF-207ENST00000436724 CEACAM16Q2WEN9 425 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 TSPO2Q5TGU0 170 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 OR4M2Q8NGB6 313 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 WDYHV1Q96HA8 205 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 NKX3-1Q99801 234 aaPredicted RBP18.57■□□□□ 0.56
PTPRF-207ENST00000436724 NLKQ9UBE8 527 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 BOLA1Q9Y3E2 137 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 TRAV17A0A0B4J275 112 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 FAM172BPA6NC97 362 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 ISG15P05161 165 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 ZNF121P58317 390 aaPredicted RBP18.57■□□□□ 0.56
PTPRF-207ENST00000436724 PSMA6P60900 246 aaKnown RBP18.57■□□□□ 0.56
PTPRF-207ENST00000436724 NDUFA5Q16718 116 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 RHOUQ7L0Q8 258 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 LRRC28Q86X40 367 aaPredicted RBP18.57■□□□□ 0.56
PTPRF-207ENST00000436724 GJC3Q8NFK1 279 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 OR4M1Q8NGD0 313 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 OR13C3Q8NGS6 347 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 ZNF671Q8TAW3 534 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 LGALS14Q8TCE9 139 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 BEX2Q9BXY8 128 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 TMEM38BQ9NVV0 291 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 ZNF319Q9P2F9 582 aa18.57■□□□□ 0.56
PTPRF-207ENST00000436724 ANKRD11Q6UB99 2663 aaPredicted RBP18.56■□□□□ 0.56
PTPRF-207ENST00000436724 AIPO00170 330 aa18.56■□□□□ 0.56
PTPRF-207ENST00000436724 TATDN3Q17R31 274 aa18.56■□□□□ 0.56
PTPRF-207ENST00000436724 FAM27BQ5VT28 67 aa18.56■□□□□ 0.56
PTPRF-207ENST00000436724 ZNF704Q6ZNC4 412 aaPredicted RBP18.56■□□□□ 0.56
PTPRF-207ENST00000436724 NAA40Q86UY6 237 aa18.56■□□□□ 0.56
PTPRF-207ENST00000436724 ELMOD2Q8IZ81 293 aa18.56■□□□□ 0.56
PTPRF-207ENST00000436724 TMEM45BQ96B21 275 aa18.56■□□□□ 0.56
PTPRF-207ENST00000436724 CAMK2AQ9UQM7 478 aa18.56■□□□□ 0.56
PTPRF-207ENST00000436724 FAM240BA0A1B0GVZ2 78 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 PATE4P0C8F1 98 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 CX3CR1P49238 355 aa18.55■□□□□ 0.56
PTPRF-207ENST00000436724 CCDC92Q53HC0 331 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms