RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 NFYCQ13952 458 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 MPPED2Q15777 294 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 VMACQ2NL98 169 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.24□□□□□ -0.45
HDAC8-213ENST00000436675 C11orf44Q8N8P7 122 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 PNLDC1Q8NA58 520 aaKnown RBP12.24□□□□□ -0.45
HDAC8-213ENST00000436675 PCYOX1LQ8NBM8 494 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 OR13C2Q8NGS9 318 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 MRAPQ8TCY5 172 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 RASSF5Q8WWW0 418 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 RASD2Q96D21 266 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 WACQ9BTA9 647 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 CCDC28BQ9BUN5 200 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 SIRPDQ9H106 197 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 DPAGT1Q9H3H5 408 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 C16orf95Q9H693 158 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 SMURF1Q9HCE7 757 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 NDUFAF1Q9Y375 327 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 FAM96BQ9Y3D0 163 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 ADAM18Q9Y3Q7 739 aa12.24□□□□□ -0.45
HDAC8-213ENST00000436675 DNAH3Q8TD57 4116 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 IQCF6A8MYZ5 107 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 FSTL3O95633 263 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 LIPFP07098 398 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 CTLA4P16410 223 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 RPL4P36578 427 aaKnown RBP12.23□□□□□ -0.45
HDAC8-213ENST00000436675 RGS6P49758 472 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 NPY4RP50391 375 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 SLC18A1P54219 525 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 MAGOHP61326 146 aaKnown RBP12.23□□□□□ -0.45
HDAC8-213ENST00000436675 OR8B8Q15620 311 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 CLEC12AQ5QGZ9 265 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 SAMD5Q5TGI4 173 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 CCDC80Q76M96 950 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 LDLRAD3Q86YD5 345 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 PIP4P2Q8N4L2 257 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
HDAC8-213ENST00000436675 Q96M85 177 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 GRHPRQ9UBQ7 328 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 BAG5Q9UL15 447 aa12.23□□□□□ -0.45
HDAC8-213ENST00000436675 COA3Q9Y2R0 106 aaPredicted RBP12.23□□□□□ -0.45
HDAC8-213ENST00000436675 COL7A1Q02388 2944 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 A0A1W2PRD5 423 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 A0A1W2PRF3 423 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 A0A1W2PRM7 423 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 EFCAB9A8MZ26 197 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 XKRYO14609 159 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 IMPA2O14732 288 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 ANGPT2O15123 496 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 GATA4P43694 442 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 YAP1P46937 504 aaKnown RBP12.22□□□□□ -0.45
HDAC8-213ENST00000436675 GZMMP51124 257 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 DBPQ10586 325 aaPredicted RBP12.22□□□□□ -0.45
HDAC8-213ENST00000436675 POU4F2Q12837 409 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 COX10Q12887 443 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 FHL1Q13642 323 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 MESTQ5EB52 335 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 KPRPQ5T749 579 aaPredicted RBP12.22□□□□□ -0.45
HDAC8-213ENST00000436675 OAFQ86UD1 273 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 NRMQ8IXM6 262 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 DPP10Q8N608 796 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 LRRC8CQ8TDW0 803 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 ECSITQ9BQ95 431 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 HCAR1Q9BXC0 346 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 PARD6BQ9BYG5 372 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 POLR2J2Q9GZM3 115 aaKnown RBP12.22□□□□□ -0.45
HDAC8-213ENST00000436675 POLR2J3Q9H1A7 115 aaKnown RBP12.22□□□□□ -0.45
HDAC8-213ENST00000436675 RHCGQ9UBD6 479 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 RNF7Q9UBF6 113 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 DNAJB11Q9UBS4 358 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 POLR1DQ9Y2S0 133 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 SIGLEC9Q9Y336 463 aa12.22□□□□□ -0.45
HDAC8-213ENST00000436675 TEX13CA0A0J9YWL9 993 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 LGALS8O00214 317 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 OR10H3O60404 316 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 SLC16A7O60669 478 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 GYPAP02724 150 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 OPN1MWP04001 364 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 OPN1MW2P0DN77 364 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 OPN1MW3P0DN78 364 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 SLC9A3P48764 834 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 CENPAP49450 140 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 BEND6Q5SZJ8 279 aaPredicted RBP12.21□□□□□ -0.45
HDAC8-213ENST00000436675 Q6ZTK2 550 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 BTN2A1Q7KYR7 527 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 VMO1Q7Z5L0 202 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 FGFRL1Q8N441 504 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 Q8TCH9 128 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 LRTOMTQ8WZ04 291 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 ITPKCQ96DU7 683 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 TOR3AQ9H497 397 aa12.21□□□□□ -0.45
HDAC8-213ENST00000436675 PRSS37A4D1T9 235 aa12.2□□□□□ -0.46
HDAC8-213ENST00000436675 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
HDAC8-213ENST00000436675 ANKRD61A6NGH8 418 aa12.2□□□□□ -0.46
HDAC8-213ENST00000436675 KHDRBS3O75525 346 aaKnown RBP12.2□□□□□ -0.46
HDAC8-213ENST00000436675 FCN3O75636 299 aa12.2□□□□□ -0.46
HDAC8-213ENST00000436675 TSPAN9O75954 239 aa12.2□□□□□ -0.46
HDAC8-213ENST00000436675 CD200P41217 278 aa12.2□□□□□ -0.46
HDAC8-213ENST00000436675 GPR4P46093 362 aa12.2□□□□□ -0.46
HDAC8-213ENST00000436675 RAD23AP54725 363 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms