RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 IRF8Q02556 426 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 UNC119Q13432 240 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 MPPED2Q15777 294 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 RFX4Q33E94 735 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 KRT71Q3SY84 523 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 CAVIN4Q5BKX8 364 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 XKR4Q5GH76 650 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 CT45A1Q5HYN5 189 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 KATNAL2Q8IYT4 538 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 C8orf31Q8N9H6 132 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 BPIFCQ8NFQ6 507 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR10J6PQ8NGY7 276 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 CT45A3Q8NHU0 189 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 DTX3LQ8TDB6 740 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 CXorf40AQ8TE69 158 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 SDR42E1Q8WUS8 393 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 ASB9Q96DX5 294 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 SEH1LQ96EE3 360 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 FAM210BQ96KR6 192 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 GLT1D1Q96MS3 346 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 TSSK3Q96PN8 268 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 P2RX4Q99571 388 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 ECSITQ9BQ95 431 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 GABARAPL3Q9BY60 117 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 LINC00597Q9H2U6 94 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 ELOVL6Q9H5J4 265 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 RPF2Q9H7B2 306 aaKnown RBP2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 UBE2ZQ9H832 354 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 C20orf96Q9NUD7 363 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 HRASLS2Q9NWW9 162 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 UXTQ9UBK9 157 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 PEF1Q9UBV8 284 aaKnown RBP2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 KCNE3Q9Y6H6 103 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 ELP1O95163 1332 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 MAPK8IP3Q9UPT6 1336 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 TJP1Q07157 1748 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 RGPD2P0DJD1 1756 aa2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 PTPRZ1P23471 2315 aaPredicted RBP2.05□□□□□ -2.08
HMGB1P27-201ENST00000431429 A0A1B0GUA9 196 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 FAM166BA8MTA8 275 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 F6UB75 175 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 K7EMT4 169 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 L7N2F9 121 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 AIM2O14862 343 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 PPP1R2P9O14990 202 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 DPM1O60762 260 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 SS18L1O75177 396 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 SUPT3HO75486 399 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 AIFM1O95831 613 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 CD160O95971 181 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 STAG3L3P0CL85 134 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 MYL2P10916 166 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF250P15622 560 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 GSTM3P21266 225 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 BCKDHBP21953 392 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 PRRC2AP48634 2157 aaKnown RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF138P52744 262 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 SIGLEC14Q08ET2 396 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 CACNA1SQ13698 1873 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 TTLL9Q3SXZ7 439 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 C2orf83Q53S99 150 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 COA6Q5JTJ3 125 aaKnown RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 PPM1LQ5SGD2 360 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 KRTAP5-11Q6L8G4 156 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 TEX43Q6ZNM6 134 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 TMEM179Q6ZVK1 233 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 EIF3MQ7L2H7 374 aaKnown RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 HDDC2Q7Z4H3 204 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF429Q86V71 674 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF433Q8N7K0 673 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 C15orf56Q8N910 161 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 OR2A1Q8NGT9 310 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZNF502Q8TBZ5 544 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLC7A13Q8TCU3 470 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ACTRT1Q8TDG2 376 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 CAPSLQ8WWF8 208 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 GIMAP1Q8WWP7 306 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 COL21A1Q96P44 957 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZIM3Q96PE6 472 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 XPO6Q96QU8 1125 aaKnown RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ABCB10Q9NRK6 738 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 RBAKQ9NYW8 714 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 PTTG3PQ9NZH4 202 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 CCDC59Q9P031 241 aaKnown RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 PDP1Q9P0J1 537 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 STOX2Q9P2F5 926 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ANKRD26Q9UPS8 1709 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 PSG8Q9UQ74 426 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ST3GAL6Q9Y274 331 aa2.04□□□□□ -2.08
HMGB1P27-201ENST00000431429 ZFHX2Q9C0A1 2572 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 IGLV1-36A0A0B4J1U3 117 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 HIDE1A8MVS5 230 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 XKRYO14609 159 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 AKR7A2O43488 359 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 KLF8O95600 359 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 GIPP09681 153 aaPredicted RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 TACSTD2P09758 323 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 GTF2E2P29084 291 aaKnown RBP2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 SLC26A3P40879 764 aa2.03□□□□□ -2.08
HMGB1P27-201ENST00000431429 UQCRFS1P47985 274 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms