RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 TNFAIP6P98066 277 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-207ENST00000430858 SLC3A1Q07837 685 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 CDK5R2Q13319 367 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 PCK2Q16822 640 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 RSPO1Q2MKA7 263 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-207ENST00000430858 CHRFAM7AQ494W8 412 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 TEX30Q5JUR7 227 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 SHQ1Q6PI26 577 aaKnown RBP8.34□□□□□ -1.07
HDAC6-207ENST00000430858 HS3ST5Q8IZT8 346 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 IQCF1Q8N6M8 205 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 LINC01356Q8N9X3 169 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 ATG16L2Q8NAA4 619 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 OR51L1Q8NGJ5 315 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 OR6K6Q8NGW6 343 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 CLDND2Q8NHS1 167 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 SPTSSAQ969W0 71 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 C1orf159Q96HA4 380 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 MAP6Q96JE9 813 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 C1QTNF5Q9BXJ0 243 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 WDR76Q9H967 626 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 MSL2Q9HCI7 577 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 DDX28Q9NUL7 540 aaKnown RBP8.34□□□□□ -1.07
HDAC6-207ENST00000430858 PTTG3PQ9NZH4 202 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 LPAR3Q9UBY5 353 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 TLN2Q9Y4G6 2542 aa8.34□□□□□ -1.07
HDAC6-207ENST00000430858 NAV3Q8IVL0 2385 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 B4DSR2 109 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 M0R135 149 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF593O00488 134 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-207ENST00000430858 SURF4O15260 269 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 TIPRLO75663 272 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 LCATP04180 440 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 SPARCP09486 303 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 SELEP16581 610 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 TNFRSF1AP19438 455 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 IL2RGP31785 369 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 RPS27P42677 84 aaKnown RBP8.33□□□□□ -1.08
HDAC6-207ENST00000430858 CDH15P55291 814 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 CDK5Q00535 292 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 MALLQ13021 153 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 CCNIQ14094 377 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 GINS1Q14691 196 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 LINC01590Q5TEZ4 76 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 C1orf146Q5VVC0 180 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 Q6ZR03 302 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 DCXRQ7Z4W1 244 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 PRIMA1Q86XR5 153 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF511Q8NB15 262 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 OR8G5Q8NG78 346 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 OR2Z1Q8NG97 314 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 OR10S1Q8NGN2 331 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 OR5K1Q8NHB7 308 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 CCL17Q92583 94 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 RAB1CQ92928 201 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF799Q96GE5 643 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 TIMD4Q96H15 378 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 ZNF582Q96NG8 517 aaPredicted RBP8.33□□□□□ -1.08
HDAC6-207ENST00000430858 SOX7Q9BT81 388 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 HCAR1Q9BXC0 346 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 TEX12Q9BXU0 123 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 BEX2Q9BXY8 128 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 SHARPINQ9H0F6 387 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 NTN4Q9HB63 628 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 KIF17Q9P2E2 1029 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 CACNG2Q9Y698 323 aa8.33□□□□□ -1.08
HDAC6-207ENST00000430858 FAM183AA6NL82 134 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 IQCF6A8MYZ5 107 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 PRR23D1E9PI22 279 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 GLCEO94923 617 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 IFNA2P01563 188 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 PRR23D2P0DMB1 279 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 FCGR1AP12314 374 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 ANPEPP15144 967 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 HNF1AP20823 631 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 IGFBP5P24593 272 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 FASP25445 335 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 GSTT1P30711 240 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 OTX1P32242 354 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 SLC6A9P48067 706 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 MVKQ03426 396 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 HLXQ14774 488 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 ATP6AP1Q15904 470 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 OR2T2Q6IF00 324 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 ACSM5Q6NUN0 579 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 FAHD1Q6P587 224 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 DRAM2Q6UX65 266 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 SHFQ7M4L6 423 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 PEG10Q86TG7 708 aaKnown RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 OR5AS1Q8N127 324 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 PARP8Q8N3A8 854 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 OR6N2Q8NGY6 317 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 OR13G1Q8NGZ3 307 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 OTULINQ96BN8 352 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 SLAMF6Q96DU3 332 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 DUS3LQ96G46 650 aaKnown RBP8.32□□□□□ -1.08
HDAC6-207ENST00000430858 INTS14Q96SY0 518 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 KCNJ15Q99712 375 aa8.32□□□□□ -1.08
HDAC6-207ENST00000430858 COPS4Q9BT78 406 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms