RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 YIPF7Q8N8F6 280 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 NUP37Q8NFH4 326 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 APOBEC3DQ96AK3 386 aaPredicted RBP9.53□□□□□ -0.88
CHD4-202ENST00000430771 C4orf45Q96LM5 186 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 BCL2L14Q9BZR8 327 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 SLCO1C1Q9NYB5 712 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 GNG8Q9UK08 70 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 ERGIC3Q9Y282 383 aa9.53□□□□□ -0.88
CHD4-202ENST00000430771 CAB39Q9Y376 341 aaPredicted RBP9.53□□□□□ -0.88
CHD4-202ENST00000430771 DOPEY2Q9Y3R5 2298 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 LOC100509620A0A075B734 347 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 TMEM129A0AVI4 362 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 METTL15A6NJ78 407 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 PRR32B1ATL7 298 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 PTGES3LE9PB15 166 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 PSMD9O00233 223 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 SIAH2O43255 324 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 SMPD2O60906 423 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 MT-ND5P03915 603 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 ANXA2P07355 339 aaKnown RBP9.52□□□□□ -0.89
CHD4-202ENST00000430771 DBHP09172 617 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 ACSM4P0C7M7 580 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 ZNF35P13682 527 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 CALCRP30988 508 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 RAD52P43351 418 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 PRKXP51817 358 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 CHN2P52757 468 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 TP53I3Q53FA7 332 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 RNLSQ5VYX0 342 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 ZNF704Q6ZNC4 412 aaPredicted RBP9.52□□□□□ -0.89
CHD4-202ENST00000430771 PRSS48Q7RTY5 328 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 LHFPL3Q86UP9 236 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 SVOPQ8N4V2 548 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 KBTBD8Q8NFY9 601 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 OR5L1Q8NGL2 311 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 OR52N1Q8NH53 320 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 ABHD4Q8TB40 342 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 SLC7A6Q92536 515 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 C4orf36Q96KX1 117 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 MND1Q9BWT6 205 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 CCDC90BQ9GZT6 254 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 DUSP21Q9H596 190 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 ACOXLQ9NUZ1 547 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 TBCCD1Q9NVR7 557 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 MRM2Q9UI43 246 aaKnown RBP9.52□□□□□ -0.89
CHD4-202ENST00000430771 GRIP1Q9Y3R0 1128 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 PCDHGB5Q9Y5G0 923 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 SNX5Q9Y5X3 404 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 R4GMQ9 66 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 COL12A1Q99715 3063 aa9.52□□□□□ -0.89
CHD4-202ENST00000430771 SPTAN1Q13813 2472 aaKnown RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 ICE1Q9Y2F5 2266 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 ACOD1A6NK06 481 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 LOC110117498-PIK3R3F6TDL0 507 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 H3BSA7 217 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 MT-ND2P03891 347 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 LCATP04180 440 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 FAM157BP0CG42 384 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 LIMS3P0CW19 117 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 LIMS4P0CW20 117 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 TUBG1P23258 451 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 C21orf33P30042 268 aaPredicted RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 WNT5AP41221 380 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 ZNF121P58317 390 aaPredicted RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 TAS2R43P59537 309 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 MALLQ13021 153 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 TBCEQ15813 527 aaPredicted RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 ZNF684Q5T5D7 378 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 RGS7BPQ6MZT1 257 aaPredicted RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 RFPL4BQ6ZWI9 263 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 TMEM200AQ86VY9 491 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 PAQR4Q8N4S7 273 aaPredicted RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 OR52H1Q8NGJ2 320 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 C14orf79Q96F83 325 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 PGAM5Q96HS1 289 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 TMEM204Q9BSN7 226 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 C1QTNF5Q9BXJ0 243 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 CDCA4Q9BXL8 241 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 OR10A2Q9H208 303 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 OR51B6Q9H340 312 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 OPA3Q9H6K4 179 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 ZNF442Q9H7R0 627 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 TRIM36Q9NQ86 728 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 TUBG2Q9NRH3 451 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 PAK1IP1Q9NWT1 392 aaPredicted RBP9.51□□□□□ -0.89
CHD4-202ENST00000430771 GTF2A1LQ9UNN4 478 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 ATP23Q9Y6H3 246 aa9.51□□□□□ -0.89
CHD4-202ENST00000430771 PRR14LQ5THK1 2151 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 TMEM269A0A1B0GVZ9 245 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 VSTM5A8MXK1 200 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 SHISA9B4DS77 424 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 J3QLW9 94 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 TBX1O43435 398 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 XRCC2O43543 280 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 RPP14O95059 124 aaKnown RBP9.5□□□□□ -0.89
CHD4-202ENST00000430771 LCKP06239 509 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 HTR1AP08908 422 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 ZNF19P17023 458 aa9.5□□□□□ -0.89
CHD4-202ENST00000430771 NR4A1P22736 598 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms