RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 J3QW42 95 aa13□□□□□ -0.33
SEC13-210ENST00000428626 HLA-DPB1P04440 258 aa13□□□□□ -0.33
SEC13-210ENST00000428626 HIST1H1CP16403 213 aaKnown RBP13□□□□□ -0.33
SEC13-210ENST00000428626 MSX2P35548 267 aaPredicted RBP13□□□□□ -0.33
SEC13-210ENST00000428626 MDH2P40926 338 aaKnown RBP13□□□□□ -0.33
SEC13-210ENST00000428626 RGS6P49758 472 aa13□□□□□ -0.33
SEC13-210ENST00000428626 RPS6KA3P51812 740 aa13□□□□□ -0.33
SEC13-210ENST00000428626 PAX8Q06710 450 aa13□□□□□ -0.33
SEC13-210ENST00000428626 RFX4Q33E94 735 aa13□□□□□ -0.33
SEC13-210ENST00000428626 LEG1Q6P5S2 330 aa13□□□□□ -0.33
SEC13-210ENST00000428626 BHLHE23Q8NDY6 225 aa13□□□□□ -0.33
SEC13-210ENST00000428626 GJC3Q8NFK1 279 aa13□□□□□ -0.33
SEC13-210ENST00000428626 OR4K13Q8NH42 304 aa13□□□□□ -0.33
SEC13-210ENST00000428626 FANK1Q8TC84 345 aa13□□□□□ -0.33
SEC13-210ENST00000428626 APOBEC3DQ96AK3 386 aaPredicted RBP13□□□□□ -0.33
SEC13-210ENST00000428626 COG8Q96MW5 612 aa13□□□□□ -0.33
SEC13-210ENST00000428626 NDEL1Q9GZM8 345 aa13□□□□□ -0.33
SEC13-210ENST00000428626 HDHD2Q9H0R4 259 aa13□□□□□ -0.33
SEC13-210ENST00000428626 SPAG4Q9NPE6 437 aa13□□□□□ -0.33
SEC13-210ENST00000428626 PNRC2Q9NPJ4 139 aaKnown RBP13□□□□□ -0.33
SEC13-210ENST00000428626 NUP50Q9UKX7 468 aa13□□□□□ -0.33
SEC13-210ENST00000428626 SAMD4AQ9UPU9 718 aaKnown RBP13□□□□□ -0.33
SEC13-210ENST00000428626 POLR1DQ9Y2S0 133 aa13□□□□□ -0.33
SEC13-210ENST00000428626 IGHV3OR16-10A0A075B7F0 116 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 OR6C68A6NDL8 312 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 DNAJC9-AS1A6NH13 148 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 IQCF6A8MYZ5 107 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 NDUFAB1O14561 156 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 ARPC3O15145 178 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 SURF4O15260 269 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 SPRY1O43609 319 aaPredicted RBP12.99□□□□□ -0.33
SEC13-210ENST00000428626 ACSM4P0C7M7 580 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 IGHV4-38-2P0DP08 117 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 PSKH1P11801 424 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 FPR2P25090 351 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 ARMCX4Q5H9R4 360 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 SLC18B1Q6NT16 456 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 DOK3Q7L591 496 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 MOGAT3Q86VF5 341 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 JAZF1Q86VZ6 243 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 OR13G1Q8NGZ3 307 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 TMEM246Q9BRR3 403 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 GORASP2Q9H8Y8 452 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 RPRD1BQ9NQG5 326 aaKnown RBP12.99□□□□□ -0.33
SEC13-210ENST00000428626 MRPL22Q9NWU5 206 aaKnown RBP12.99□□□□□ -0.33
SEC13-210ENST00000428626 ADA2Q9NZK5 511 aa12.99□□□□□ -0.33
SEC13-210ENST00000428626 C5orf63A6NC05 138 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 CRABP1P29762 137 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 GGT2P36268 569 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 SPIBQ01892 262 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 MAB21L1Q13394 359 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 GK2Q14410 553 aaPredicted RBP12.98□□□□□ -0.33
SEC13-210ENST00000428626 ESCO2Q56NI9 601 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 ZBTB46Q86UZ6 589 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 KLBQ86Z14 1044 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 OR10S1Q8NGN2 331 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 ZNRF4Q8WWF5 429 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 CMTM5Q96DZ9 223 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 PYURFQ96I23 114 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 ZNF582Q96NG8 517 aaPredicted RBP12.98□□□□□ -0.33
SEC13-210ENST00000428626 NTN4Q9HB63 628 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 DDX28Q9NUL7 540 aaKnown RBP12.98□□□□□ -0.33
SEC13-210ENST00000428626 CD300AQ9UGN4 299 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 PCDHGB1Q9Y5G3 927 aa12.98□□□□□ -0.33
SEC13-210ENST00000428626 F5H5K5 113 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 WIPF1O43516 503 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 GADD45GO95257 159 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 HKR1P10072 659 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 RPS2P15880 293 aaKnown RBP12.97□□□□□ -0.33
SEC13-210ENST00000428626 PRTN3P24158 256 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 FPR3P25089 353 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 PRDX6P30041 224 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 SLC6A6P31641 620 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 RPS27P42677 84 aaKnown RBP12.97□□□□□ -0.33
SEC13-210ENST00000428626 GSSP48637 474 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 SLC27A4Q6P1M0 643 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 DNM1P34Q6PK57 102 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 LYPD4Q6UWN0 246 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 LYPD2Q6UXB3 125 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 MUC20Q8N307 709 aaPredicted RBP12.97□□□□□ -0.33
SEC13-210ENST00000428626 C19orf18Q8NEA5 215 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 SDR9C7Q8NEX9 313 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 OR5L1Q8NGL2 311 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 MAP6Q96JE9 813 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 DDOQ99489 341 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 IFT27Q9BW83 186 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 SSBP3Q9BWW4 388 aaPredicted RBP12.97□□□□□ -0.33
SEC13-210ENST00000428626 CYB5R1Q9UHQ9 305 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 LRCH1Q9Y2L9 728 aa12.97□□□□□ -0.33
SEC13-210ENST00000428626 IGHV2-70DA0A0C4DH43 119 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 ARPC2O15144 300 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 OR10H3O60404 316 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 HSD17B1P14061 328 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 RRM2P31350 389 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 SRP9P49458 86 aaKnown RBP12.96□□□□□ -0.33
SEC13-210ENST00000428626 TRAP1Q12931 704 aaKnown RBP12.96□□□□□ -0.33
SEC13-210ENST00000428626 KRT72Q14CN4 511 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 MPPED2Q15777 294 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 ZNF181Q2M3W8 571 aa12.96□□□□□ -0.33
SEC13-210ENST00000428626 ZNF404Q494X3 552 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms