RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ZNF582Q96NG8 517 aaPredicted RBP13.8□□□□□ -0.2
VARS-216ENST00000428445 NUDT16L1Q9BRJ7 211 aaKnown RBP13.8□□□□□ -0.2
VARS-216ENST00000428445 MARCH7Q9H992 704 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 MIOXQ9UGB7 285 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 TMEM5Q9Y2B1 443 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 IER3IP1Q9Y5U9 82 aa13.8□□□□□ -0.2
VARS-216ENST00000428445 KIR2DS1A0A191URI9 304 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 DCTN6O00399 190 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 FSTL3O95633 263 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 CDKN2AP42771 156 aaKnown RBP13.79□□□□□ -0.2
VARS-216ENST00000428445 FXYD6P3P58550 94 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 RELBQ01201 579 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 ZNF404Q494X3 552 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 IFI44LQ53G44 452 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 CYP4Z1Q86W10 505 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 SLC15A3Q8IY34 581 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 FITM2Q8N6M3 262 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 OR5L1Q8NGL2 311 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 ZDHHC16Q969W1 377 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 RCN3Q96D15 328 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 SLC30A2Q9BRI3 323 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 SLITRK2Q9H156 845 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 NMNAT1Q9HAN9 279 aaPredicted RBP13.79□□□□□ -0.2
VARS-216ENST00000428445 RPS6KA6Q9UK32 745 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 CAPN7Q9Y6W3 813 aa13.79□□□□□ -0.2
VARS-216ENST00000428445 WNK1Q9H4A3 2382 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 C22orf46C9J442 243 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 CXCR6O00574 342 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 SFTPBP07988 381 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 H2AFXP16104 143 aaPredicted RBP13.78□□□□□ -0.2
VARS-216ENST00000428445 PITPNBP48739 271 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 SRP9P49458 86 aaKnown RBP13.78□□□□□ -0.2
VARS-216ENST00000428445 KRTAP10-3P60369 221 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 LIPEQ05469 1076 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 MAB21L1Q13394 359 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 PRAMEF6Q5VXH4 476 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 PGM2L1Q6PCE3 622 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 FIP1L1Q6UN15 594 aaKnown RBP13.78□□□□□ -0.2
VARS-216ENST00000428445 ZNF841Q6ZN19 808 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 FKBP9P1Q75LS8 142 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 OR8B3Q8NGG8 313 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 SLC7A13Q8TCU3 470 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 HSH2DQ96JZ2 352 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 OR8B2Q96RD0 313 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 SRA1Q9HD15 236 aaKnown RBP13.78□□□□□ -0.2
VARS-216ENST00000428445 NRIP3Q9NQ35 241 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 UFSP2Q9NUQ7 469 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 TMEM100Q9NV29 134 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 ARMCX1Q9P291 453 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 SIGLEC7Q9Y286 467 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 POLR1DQ9Y2S0 133 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 LHFPL6Q9Y693 200 aa13.78□□□□□ -0.2
VARS-216ENST00000428445 A0A1W2PRQ8 180 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 IQCF6A8MYZ5 107 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 GSTA4O15217 222 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 NDUFB2O95178 105 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 SERPINA1P01009 418 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 PPIAL4GP0DN37 164 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 NCK1P16333 377 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 FPR3P25089 353 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 SDHAP31040 664 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 DGCR6Q14129 220 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 MPPED2Q15777 294 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 KCNMB1Q16558 191 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 WDR25Q64LD2 544 aaPredicted RBP13.77□□□□□ -0.21
VARS-216ENST00000428445 SFRP4Q6FHJ7 346 aaPredicted RBP13.77□□□□□ -0.21
VARS-216ENST00000428445 LINC00346Q8IVM7 164 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 BOLLQ8N9W6 283 aaKnown RBP13.77□□□□□ -0.21
VARS-216ENST00000428445 APOBEC3DQ96AK3 386 aaPredicted RBP13.77□□□□□ -0.21
VARS-216ENST00000428445 PLEKHA8Q96JA3 519 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 GPX7Q96SL4 187 aaPredicted RBP13.77□□□□□ -0.21
VARS-216ENST00000428445 PCGF1Q9BSM1 259 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 CHIAQ9BZP6 476 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 RASSF4Q9H2L5 321 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 EFCAB1Q9HAE3 211 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 FGFR1OP2Q9NVK5 253 aa13.77□□□□□ -0.21
VARS-216ENST00000428445 VSX1Q9NZR4 365 aaPredicted RBP13.77□□□□□ -0.21
VARS-216ENST00000428445 SRRM5B3KS81 715 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 FAM20BO75063 409 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 DIRAS1O95057 198 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 KNG1P01042 644 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 ANOS1P23352 680 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 OMPP47874 163 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 HIST1H3AP68431 136 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 SEC23BQ15437 767 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 HIST2H3PS2Q5TEC6 136 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 Q6YL49 198 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 CFAP77Q6ZQR2 320 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 HIST2H3AQ71DI3 136 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 GJC3Q8NFK1 279 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 WFDC12Q8WWY7 111 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 KRCC1Q9NPI7 259 aaPredicted RBP13.76□□□□□ -0.21
VARS-216ENST00000428445 C1RLQ9NZP8 487 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 CTSZQ9UBR2 303 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 CLN8Q9UBY8 286 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 FAM32AQ9Y421 112 aaKnown RBP13.76□□□□□ -0.21
VARS-216ENST00000428445 ENPP4Q9Y6X5 453 aa13.76□□□□□ -0.21
VARS-216ENST00000428445 TRBV4-1A0A0J9YWV2 114 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms