RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 FCRL6Q6DN72 434 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 PAPD4Q6PIY7 484 aaKnown RBP4.61□□□□□ -1.67
RIF1-203ENST00000428287 ZNF227Q86WZ6 799 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 LMNTD1Q8N9Z9 388 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 SECTM1Q8WVN6 248 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 GNRHR2Q96P88 292 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 TNFRSF13CQ96RJ3 184 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 LRFN1Q9P244 771 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 FBXO7Q9Y3I1 522 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 MASP2O00187 686 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 DCTN6O00399 190 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 CKMP06732 381 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 SFTA3P0C7M3 94 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 NQO2P16083 231 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 TSPAN7P41732 249 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 QRFPP83859 136 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 BEX3Q00994 111 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 NHLH2Q02577 135 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 UBE2V2Q15819 145 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 DEFB115Q30KQ5 88 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 FNDC3BQ53EP0 1204 aaKnown RBP4.61□□□□□ -1.67
RIF1-203ENST00000428287 RNASE12Q5GAN4 147 aaKnown RBP4.61□□□□□ -1.67
RIF1-203ENST00000428287 CDPF1Q6NVV7 123 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 SLC35D2Q76EJ3 337 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 CMTM8Q8IZV2 173 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 PFN4Q8NHR9 129 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 ADAMTS15Q8TE58 950 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 ABHD5Q8WTS1 349 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 SMARCD2Q92925 531 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 C3orf49Q96BT1 292 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 SRMSQ9H3Y6 488 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 TREM1Q9NP99 234 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 SIRT7Q9NRC8 400 aa4.61□□□□□ -1.67
RIF1-203ENST00000428287 NPIPB13A6NJU9 1138 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 GPR89AB7ZAQ6 455 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 NPIPB4C9JG80 1138 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 GALTP07902 379 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 GPR89BP0CG08 455 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PET100P0DJ07 73 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 NTSP30990 170 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PDLIM4P50479 330 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PRKAG1P54619 331 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ACSF3Q4G176 576 aaPredicted RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 OR4C11Q6IEV9 310 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 CDRT4Q8N9R6 151 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 OR4E2Q8NGC2 313 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 KTI12Q96EK9 354 aaPredicted RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 Q96M85 177 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 TUBD1Q9UJT1 453 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 LAMA5O15230 3695 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 TERTO14746 1132 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 BRINP1O60477 761 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 MRPL3P09001 348 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 ZNF708P17019 499 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 GUCA2AQ02747 115 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 BEX5Q5H9J7 111 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 OR52W1Q6IF63 320 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ZNF679Q8IYX0 411 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PRR18Q8N4B5 295 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ZNF511Q8NB15 262 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 HSD17B11Q8NBQ5 300 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 VN1R2Q8NFZ6 395 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 BRI3BPQ8WY22 251 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 AKR1E2Q96JD6 320 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 HIST1H2BLQ99880 126 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SULT4A1Q9BR01 284 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 C5orf66Q9H5L9 145 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 TRPV4Q9HBA0 871 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 C19orf12Q9NSK7 152 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SRPK3Q9UPE1 567 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 AMDHD2Q9Y303 409 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ADAM10O14672 748 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 AMY2AP04746 511 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 DCNP07585 359 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 LINC00614P0C842 121 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 MMP16P51512 607 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ERVFRD-1P60508 538 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 TGIF1Q15583 401 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ZNF260Q3ZCT1 412 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SOHLH1Q5JUK2 328 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ULK3Q6PHR2 472 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 Q7L0L9 218 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SLC35E3Q7Z769 313 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 MRPL52Q86TS9 123 aaKnown RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 TCEAL8Q8IYN2 117 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 NKAIN3Q8N8D7 197 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 OR7G2Q8NG99 324 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SCARF2Q96GP6 870 aaPredicted RBP4.6□□□□□ -1.67
RIF1-203ENST00000428287 RAB33BQ9H082 229 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 SLC26A1Q9H2B4 701 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 HRH4Q9H3N8 390 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 GTF2A1LQ9UNN4 478 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ENTPD2Q9Y5L3 495 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 A0A087WV48 116 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 LY86O95711 162 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 PNPP00491 289 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 CD2P06729 351 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 AKR1A1P14550 325 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 CD34P28906 385 aa4.6□□□□□ -1.67
RIF1-203ENST00000428287 ALG10BQ5I7T1 473 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms