RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SLC25A46Q96AG3 418 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 RAB33BQ9H082 229 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 NTN4Q9HB63 628 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
RPL28-202ENST00000426763 SLC22A13Q9Y226 551 aa12.49□□□□□ -0.41
RPL28-202ENST00000426763 MEIOCA2RUB1 952 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 GLAP06280 429 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 APEX1P27695 318 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 SLC37A1P57057 533 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 SOX8P57073 446 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 OGFOD3Q6PK18 319 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 RDH10Q8IZV5 341 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 ELMOD3Q96FG2 381 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 RGCCQ9H4X1 137 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 HRASLSQ9HDD0 168 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 CHST2Q9Y4C5 530 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 TEX51A0A1B0GUA7 166 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 FOXS1O43638 330 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 PCBP3P57721 371 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 RHEBQ15382 184 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 OR1J1Q8NGS3 322 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 EXO1Q9UQ84 846 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 GABRA1P14867 456 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 NFYAP23511 347 aaPredicted RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 PSG6Q00889 435 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 RAB35Q15286 201 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 GCNT2Q8N0V5 402 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 SAP25Q8TEE9 199 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 PTPMT1Q8WUK0 201 aaPredicted RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 ARID2Q68CP9 1835 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 CEP290O15078 2479 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 SRP9P49458 86 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 CBLN3Q6UW01 205 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 SLC25A45Q8N413 288 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 OR2G2Q8NGZ5 317 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 OR4Q3Q8NH05 313 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 OTOSQ8NHW6 89 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 SMAP2Q8WU79 429 aaPredicted RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 MFFQ9GZY8 342 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 C20orf141Q9NUB4 165 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 CCL27Q9Y4X3 112 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 ZNF816-ZNF321PA0A0X1KG74 233 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 ARPC3O15145 178 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 WISP3O95389 354 aaPredicted RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 APEHP13798 732 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 AGFG1P52594 562 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 EIF2S3LQ2VIR3 472 aaKnown RBP12.48□□□□□ -0.41
RPL28-202ENST00000426763 SPAG17Q6Q759 2223 aa12.48□□□□□ -0.41
RPL28-202ENST00000426763 DICER1Q9UPY3 1922 aaKnown RBP12.47□□□□□ -0.41
RPL28-202ENST00000426763 PMP2P02689 132 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 PTBP1P26599 531 aaKnown RBP eCLIP12.47□□□□□ -0.41
RPL28-202ENST00000426763 LTBRP36941 435 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 DCAF10Q5QP82 559 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 OTPQ5XKR4 325 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 TFAP2EQ6VUC0 442 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 BATF2Q8N1L9 274 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 PRSS35Q8N3Z0 413 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 GIMAP1Q8WWP7 306 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 SOWAHCQ53LP3 525 aaPredicted RBP12.47□□□□□ -0.41
RPL28-202ENST00000426763 PDZD9Q8IXQ8 264 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 CTXN2P0C2S0 81 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 GPR155Q7Z3F1 870 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 OR10K1Q8NGX5 313 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 TMEM100Q9NV29 134 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 PCSK6P29122 969 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 EPHA2P29317 976 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 SNCAP37840 140 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 TATDN3Q17R31 274 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 OR4A16Q8NH70 328 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 CA5BP1Q8WTZ4 195 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 TECTBQ96PL2 329 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 UGT2A1Q9Y4X1 527 aa12.47□□□□□ -0.41
RPL28-202ENST00000426763 EFSO43281 561 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 BMP5P22003 454 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 S100A7AQ86SG5 101 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 FAM109AQ8N4B1 249 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 DEFB108BQ8NET1 73 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 OR10J5Q8NHC4 309 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 SCPEP1Q9HB40 452 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 RBFOX1Q9NWB1 397 aaKnown RBP12.46□□□□□ -0.41
RPL28-202ENST00000426763 FBXO7Q9Y3I1 522 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 ZNF236Q9UL36 1845 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.41
RPL28-202ENST00000426763 GP2P55259 537 aaKnown RBP12.46□□□□□ -0.41
RPL28-202ENST00000426763 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 AIPO00170 330 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 GPX5O75715 221 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 PTAFRP25105 342 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 RAC3P60763 192 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 CDK5Q00535 292 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 SLC23A3Q6PIS1 610 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 SIAH3Q8IW03 269 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 BEST4Q8NFU0 473 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 FCRL1Q96LA6 429 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 GFOD1Q9NXC2 390 aa12.46□□□□□ -0.41
RPL28-202ENST00000426763 SLCO1B1Q9Y6L6 691 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 179.2 ms