RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 GTF3AQ92664 365 aaKnown RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 UBE2FQ969M7 185 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 SPTSSAQ969W0 71 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 APOBEC3DQ96AK3 386 aaPredicted RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 ZNF799Q96GE5 643 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 CNN2Q99439 309 aaKnown RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 TEAD3Q99594 435 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 VRK1Q99986 396 aaPredicted RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 TTTY10Q9BZA0 68 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 PTTG3PQ9NZH4 202 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 H2AFY2Q9P0M6 372 aaPredicted RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 TAAR3PQ9P1P4 343 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 NKX1-2Q9UD57 310 aaPredicted RBP10.69□□□□□ -0.7
SKA1-203ENST00000417656 STARD10Q9Y365 291 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 GMPPBQ9Y5P6 360 aa10.69□□□□□ -0.7
SKA1-203ENST00000417656 H3BSA7 217 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 J3QW42 95 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 DLGAP1O14490 977 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 CASQ2O14958 399 aaPredicted RBP10.68□□□□□ -0.7
SKA1-203ENST00000417656 LYNP07948 512 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 SLC2A1P11166 492 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 NAT2P11245 290 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 OTX1P32242 354 aaPredicted RBP10.68□□□□□ -0.7
SKA1-203ENST00000417656 EVX1P49640 407 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 NUDT6P53370 316 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 HCCSP53701 268 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 TPTEP56180 551 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 SELENOVP59797 346 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 OGFRL1Q5TC84 451 aaPredicted RBP10.68□□□□□ -0.7
SKA1-203ENST00000417656 SHEQ5VZ18 495 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 MBNL2Q5VZF2 373 aaKnown RBP10.68□□□□□ -0.7
SKA1-203ENST00000417656 SPNS3Q6ZMD2 512 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 NAA40Q86UY6 237 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 C1orf174Q8IYL3 243 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 RFLNBQ8N5W9 214 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 THEM6Q8WUY1 208 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 RNF133Q8WVZ7 376 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 Q96MF0 132 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 ZNF582Q96NG8 517 aaPredicted RBP10.68□□□□□ -0.7
SKA1-203ENST00000417656 RDH12Q96NR8 316 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 KCNJ15Q99712 375 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 DCLRE1BQ9H816 532 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 BARX1Q9HBU1 254 aaPredicted RBP10.68□□□□□ -0.7
SKA1-203ENST00000417656 ADGRL4Q9HBW9 690 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 AASSQ9UDR5 926 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 COPS3Q9UNS2 423 aa10.68□□□□□ -0.7
SKA1-203ENST00000417656 C5orf63A6NC05 138 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 PRR32B1ATL7 298 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 SSX4O60224 188 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 APOL3O95236 402 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 IGHV3-13P01766 116 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 LCATP04180 440 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 HSD11B1P28845 292 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 HTR1FP30939 366 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 OPRL1P41146 370 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 CX3CR1P49238 355 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 EFNA4P52798 201 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 PRSS12P56730 875 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 GRB2P62993 217 aaKnown RBP10.67□□□□□ -0.7
SKA1-203ENST00000417656 HLXQ14774 488 aaPredicted RBP10.67□□□□□ -0.7
SKA1-203ENST00000417656 SNAI3Q3KNW1 292 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 PRSS57Q6UWY2 283 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 DRAM2Q6UX65 266 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 LRRN1Q6UXK5 716 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 COLCA1Q6ZS62 124 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 ZNF771Q7L3S4 317 aaPredicted RBP10.67□□□□□ -0.7
SKA1-203ENST00000417656 ZNF525Q8N782 197 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 PACRGLQ8N7B6 248 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 ZNF283Q8N7M2 679 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 OR51G2Q8NGK0 314 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 SNX33Q8WV41 574 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 COG8Q96MW5 612 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 C1QTNF5Q9BXJ0 243 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 YIPF3Q9GZM5 350 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 C8orf4Q9NR00 106 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 FAM118AQ9NWS6 357 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 SLCO1C1Q9NYB5 712 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 WARS2Q9UGM6 360 aaKnown RBP10.67□□□□□ -0.7
SKA1-203ENST00000417656 LAMP5Q9UJQ1 280 aa10.67□□□□□ -0.7
SKA1-203ENST00000417656 FBXO9Q9UK97 447 aaPredicted RBP10.67□□□□□ -0.7
SKA1-203ENST00000417656 ITPR3Q14573 2671 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 LOC100130705A0A1B0GUX0 176 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 TRIM64A6NGJ6 449 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 TRIM64BA6NI03 449 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 ZSCAN5BA6NJL1 495 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 H0YHG0 523 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
SKA1-203ENST00000417656 ENTPD6O75354 484 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 H2BFMP0C1H6 154 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 ALOX5APP20292 161 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 SLC15A1P46059 708 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 SNRPGP62308 76 aaKnown RBP10.66□□□□□ -0.7
SKA1-203ENST00000417656 SLC34A1Q06495 639 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 PSG7Q13046 419 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 CLEC12BQ2HXU8 276 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 TGIF2LYQ8IUE0 185 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 SLC35F2Q8IXU6 374 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 ENTHD1Q8IYW4 607 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 ZNF555Q8NEP9 628 aa10.66□□□□□ -0.7
SKA1-203ENST00000417656 OR5L1Q8NGL2 311 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms