RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 KRTAP27-1Q3LI81 207 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 OTPQ5XKR4 325 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 OR2T2Q6IF00 324 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 C12orf54Q6X4T0 127 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 PIGWQ7Z7B1 504 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 ZDHHC21Q8IVQ6 265 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 POP5Q969H6 163 aaKnown RBP15.52■□□□□ 0.08
VPS16-204ENST00000417508 SIGLEC11Q96RL6 698 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 RBM4Q9BWF3 364 aaKnown RBP15.52■□□□□ 0.08
VPS16-204ENST00000417508 HCAR1Q9BXC0 346 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 GCM1Q9NP62 436 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 RPRD1BQ9NQG5 326 aaKnown RBP15.52■□□□□ 0.08
VPS16-204ENST00000417508 DCAF16Q9NXF7 216 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 OPN4Q9UHM6 478 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 CYB5R1Q9UHQ9 305 aa15.52■□□□□ 0.08
VPS16-204ENST00000417508 GPANK1O95872 356 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 ADRA2CP18825 462 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 MSX2P35548 267 aaPredicted RBP15.51■□□□□ 0.07
VPS16-204ENST00000417508 ZNF181Q2M3W8 571 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 SLC18B1Q6NT16 456 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 CORO6Q6QEF8 472 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 ZNF620Q6ZNG0 422 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 DEFB107AQ8IZN7 70 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 OR5AS1Q8N127 324 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 BPIFB2Q8N4F0 458 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 PITX2Q99697 317 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 SLC30A2Q9BRI3 323 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 TRIM15Q9C019 465 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 NTN4Q9HB63 628 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 TMEM100Q9NV29 134 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 ARL8BQ9NVJ2 186 aa15.51■□□□□ 0.07
VPS16-204ENST00000417508 A0A1B0GWJ7 208 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 OR6C68A6NDL8 312 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 A8MXK9 166 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 FSHBP01225 129 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 HLA-DQA2P01906 255 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 ACSM4P0C7M7 580 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 COMPP49747 757 aaPredicted RBP15.5■□□□□ 0.07
VPS16-204ENST00000417508 ERFP50548 548 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 MXRA7P84157 204 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 MALLQ13021 153 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 ZMYND11Q15326 602 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 PGBD2Q6P3X8 592 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.5■□□□□ 0.07
VPS16-204ENST00000417508 CELF2-AS1Q8N7Q2 184 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 OR52L1Q8NGH7 329 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 OR52E2Q8NGJ4 325 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 MEGF10Q96KG7 1140 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 ATF6BQ99941 703 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 IL20Q9NYY1 176 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 ACTR3BQ9P1U1 418 aa15.5■□□□□ 0.07
VPS16-204ENST00000417508 LRRC30A6NM36 301 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 F5H0A9 414 aaPredicted RBP15.49■□□□□ 0.07
VPS16-204ENST00000417508 WNT2P09544 360 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 ZNF823P16415 610 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 ZNF12P17014 697 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 GGT2P36268 569 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 MMP16P51512 607 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 TPTEP56180 551 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 GNGT1P63211 74 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.49■□□□□ 0.07
VPS16-204ENST00000417508 ESCO2Q56NI9 601 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 ZNF771Q7L3S4 317 aaPredicted RBP15.49■□□□□ 0.07
VPS16-204ENST00000417508 C1orf87Q8N0U7 546 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 ARHGAP24Q8N264 748 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 ERGIC1Q969X5 290 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 LRCH1Q9Y2L9 728 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 LYVE1Q9Y5Y7 322 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 AUP1Q9Y679 476 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 CDH10Q9Y6N8 788 aa15.49■□□□□ 0.07
VPS16-204ENST00000417508 TMEM89A2RUT3 159 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 F5H5K5 113 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 TNFRSF11BO00300 401 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 GATA4P43694 442 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 ACTG1P63261 375 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 TRAP1Q12931 704 aaKnown RBP15.48■□□□□ 0.07
VPS16-204ENST00000417508 ZNF154Q13106 437 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 SLC35F1Q5T1Q4 408 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 CFAP77Q6ZQR2 320 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 LINC00346Q8IVM7 164 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 DEFB108BQ8NET1 73 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 SDR9C7Q8NEX9 313 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 OR2T4Q8NH00 348 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 GCDHQ92947 438 aaPredicted RBP15.48■□□□□ 0.07
VPS16-204ENST00000417508 DVL3Q92997 716 aaPredicted RBP15.48■□□□□ 0.07
VPS16-204ENST00000417508 SPTSSAQ969W0 71 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 DDOQ99489 341 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 MRI1Q9BV20 369 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 SLC22A4Q9H015 551 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 TMEM165Q9HC07 324 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 MMP26Q9NRE1 261 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 MIOXQ9UGB7 285 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 NOP16Q9Y3C1 178 aaKnown RBP15.48■□□□□ 0.07
VPS16-204ENST00000417508 INSIG2Q9Y5U4 225 aa15.48■□□□□ 0.07
VPS16-204ENST00000417508 TRAPPC2LH3BP13 241 aa15.47■□□□□ 0.07
VPS16-204ENST00000417508 LCATP04180 440 aa15.47■□□□□ 0.07
VPS16-204ENST00000417508 GK2Q14410 553 aaPredicted RBP15.47■□□□□ 0.07
VPS16-204ENST00000417508 RASSF6Q6ZTQ3 369 aa15.47■□□□□ 0.07
VPS16-204ENST00000417508 OR10AD1Q8NGE0 317 aa15.47■□□□□ 0.07
VPS16-204ENST00000417508 PLEKHA8Q96JA3 519 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms