RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 E9PLN8 166 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 LMO7DNF2Z398 122 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 H3BTX0 84 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 GYG2O15488 501 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 WDR1O75083 606 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 LDB3O75112 727 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CNMDO75829 334 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 FGF19O95750 216 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TTLL1O95922 423 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CD160O95971 181 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 GASTP01350 101 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 P04436 131 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CTSLP07711 333 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 MPC1LP0DKB6 136 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SMIM18P0DKX4 95 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CD79AP11912 226 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TBPP20226 339 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 IDSP22304 550 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 BDKRB1P46663 353 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 P2RY1P47900 373 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 RAB5CP51148 216 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SGSHP51688 502 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 GEMP55040 296 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 DLX6P56179 175 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CLDN15P56746 228 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CLDN6P56747 220 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 PIGPP57054 158 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CLDN2P57739 230 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CLRN1P58418 232 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TAS2R43P59537 309 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 COL10A1Q03692 680 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 PRKCDQ05655 676 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 BAXQ07812 192 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SRSF4Q08170 494 aaKnown RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF155Q12901 538 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 MELKQ14680 651 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF846Q147U1 533 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 EXOSC7Q15024 291 aaKnown RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TAL2Q16559 108 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF74Q16587 644 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 UPP1Q16831 310 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TTLL9Q3SXZ7 439 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 VWA2Q5GFL6 755 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 FNBP1LQ5T0N5 605 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 NCMAPQ5T1S8 102 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 AVPI1Q5T686 147 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 HIST2H3PS2Q5TEC6 136 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 KIAA0895LQ68EN5 471 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 PAQR6Q6TCH4 344 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ENPP6Q6UWR7 440 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 GSG1LQ6UXU4 331 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF620Q6ZNG0 422 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 Q6ZT83 130 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 MBOAT2Q6ZWT7 520 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF627Q7L945 461 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 DEFB128Q7Z7B8 93 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ACOT1Q86TX2 421 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 NOXA1Q86UR1 476 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 DND1Q8IYX4 353 aaKnown RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 LYG1Q8N1E2 194 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 GCSAMQ8N6F7 178 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 IQCF1Q8N6M8 205 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 KIR3DL3Q8N743 410 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SLC30A7Q8NEW0 376 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 OR4E2Q8NGC2 313 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 OR52E4Q8NGH9 312 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 OR4D11Q8NGI4 311 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 OR13G1Q8NGZ3 307 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ZNF420Q8TAQ5 688 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TMEM170AQ8WVE7 144 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 XAGE5Q8WWM1 108 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 OR8D1Q8WZ84 308 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 GALMQ96C23 342 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ROPN1LQ96C74 230 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 RCN3Q96D15 328 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SMIM8Q96KF7 97 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 RCHY1Q96PM5 261 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 DUX3Q96PT4 197 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 OR52E6Q96RD3 313 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 P2RX4Q99571 388 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TBX5Q99593 518 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 GPR22Q99680 433 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 VKORC1Q9BQB6 163 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SULT4A1Q9BR01 284 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 NDC1Q9BTX1 674 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 C1orf50Q9BV19 199 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 RAB11FIP5Q9BXF6 653 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SNHG12Q9BXW3 62 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 PECRQ9BY49 303 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 ACTR3CQ9C0K3 210 aaPredicted RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 NAA50Q9GZZ1 169 aaKnown RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CXorf36Q9H7Y0 433 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 RNF122Q9H9V4 155 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 NMRAL1Q9HBL8 299 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 SLC2A4RGQ9NR83 387 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 DCAF13Q9NV06 445 aaKnown RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 C14orf105Q9NVL8 296 aa3.17□□□□□ -1.9
SF3B1-203ENST00000414174 TESQ9UGI8 421 aaKnown RBP3.17□□□□□ -1.9
SF3B1-203ENST00000414174 CCNL1Q9UK58 526 aaPredicted RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms