RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 EDEM2Q9BV94 578 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 COA4Q9NYJ1 87 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 MRPS33Q9Y291 106 aaKnown RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 IGLV1-36A0A0B4J1U3 117 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 TMEM269A0A1B0GVZ9 245 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 TXNDC12O95881 172 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 GFERP55789 205 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 PDZK1IP1Q13113 114 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 ZNF260Q3ZCT1 412 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 ARMC6Q6NXE6 501 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 C19orf47Q8N9M1 422 aaKnown RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 PNLDC1Q8NA58 520 aaKnown RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 OR4K17Q8NGC6 315 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 NANPQ8TBE9 248 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 THAP3Q8WTV1 239 aaPredicted RBP13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 TMEM14AQ9Y6G1 99 aa13.03□□□□□ -0.32
SEMA3F-202ENST00000413852 MEX3AA1L020 520 aaKnown RBP13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 TO15178 435 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 SSX5O60225 188 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 CD2P06729 351 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 IGFBP3P17936 291 aaPredicted RBP13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 NME2P22392 152 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 FUT7Q11130 342 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 AIMP2Q13155 320 aaKnown RBP13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 ELAVL1Q15717 326 aaKnown RBP13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 SVBPQ8N300 66 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 TMEM104Q8NE00 496 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 PMM1Q92871 262 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 PHB2Q99623 299 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 SLC19A3Q9BZV2 496 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 CYTL1Q9NRR1 136 aa13.02□□□□□ -0.32
SEMA3F-202ENST00000413852 CLDN4O14493 209 aa13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 ZNF205O95201 554 aa13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 SERPINA5P05154 406 aa13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 SLC25A4P12235 298 aa13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 MUC1P15941 1255 aaPredicted RBP13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 HNRNPA2B1P22626 353 aaKnown RBP13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 MST1LQ2TV78 715 aa13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 TEX30Q5JUR7 227 aa13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.33
SEMA3F-202ENST00000413852 FBXO24O75426 580 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 CD74P04233 296 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 DAOP14920 347 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 PSMB6P28072 239 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 RPL27P61353 136 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 SNRPEP62304 92 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 ZNF585AQ6P3V2 769 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 SMIM3Q9BZL3 60 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 G6PC2Q9NQR9 355 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 CTSFQ9UBX1 484 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 DMDP11532 3685 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 PHF3Q92576 2039 aaKnown RBP13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 LDLRAD4O15165 306 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 CRHP06850 196 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 VSIG8P0DPA2 414 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 SLC37A1P57057 533 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 VWA2Q5GFL6 755 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 OR5D18Q8NGL1 313 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 SOHLH2Q9NX45 425 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 NDRG3Q9UGV2 375 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 A0A1B0GV50 99 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 SOCS1O15524 211 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 ABOP16442 354 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 BCKDHBP21953 392 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 B2MP61769 119 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 DRAM2Q6UX65 266 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 NPRL2Q8WTW4 380 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 ARL5BQ96KC2 179 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 OR10C1Q96KK4 312 aa13.01□□□□□ -0.33
SEMA3F-202ENST00000413852 A0A0A6YYD4 124 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 IGHV3-20A0A0C4DH32 117 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 A0A1B0GW55 424 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 ZNF354AO60765 605 aaPredicted RBP13□□□□□ -0.33
SEMA3F-202ENST00000413852 EIF3GO75821 320 aaKnown RBP eCLIP13□□□□□ -0.33
SEMA3F-202ENST00000413852 IFNA6P05013 189 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 HOXB5P09067 269 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 DUX4L2P0CJ85 424 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 DUX4L3P0CJ86 424 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 DUX4L4P0CJ87 422 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 DUX4L5P0CJ88 424 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 DUX4L6P0CJ89 424 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 DUX4L7P0CJ90 424 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 CBX5P45973 191 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 S100A10P60903 97 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 CPEB4Q17RY0 729 aaKnown RBP eCLIP13□□□□□ -0.33
SEMA3F-202ENST00000413852 TTLL10Q6ZVT0 673 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 RAB11FIP2Q7L804 512 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 GALNTL5Q7Z4T8 443 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 OR52N5Q8NH56 324 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 AQP3Q92482 292 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 CNTNAP3BQ96NU0 1288 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 TGM7Q96PF1 710 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 C20orf24Q9BUV8 137 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 SLC2A4RGQ9NR83 387 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 DUX4Q9UBX2 424 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 HHLA2Q9UM44 414 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 KLF2Q9Y5W3 355 aaPredicted RBP13□□□□□ -0.33
SEMA3F-202ENST00000413852 PPICP45877 212 aa13□□□□□ -0.33
SEMA3F-202ENST00000413852 ZNF345Q14585 488 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms