RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 C17orf78Q8N4C9 275 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 MRPS24Q96EL2 167 aaKnown RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 JAM3Q9BX67 310 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ASB7Q9H672 318 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SIRPGQ9P1W8 387 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 TRDV1A0A1B0GX56 115 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 A0A1W2PQM1 296 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 HMX2A2RU54 273 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 MPTX1A8MV57 137 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 KLF11O14901 512 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 DUX1O43812 170 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PRKNO60260 465 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CNTFRP26992 372 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 TBC1D28Q2M2D7 210 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 OR10J3Q5JRS4 329 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM182Q6ZP80 229 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 OR1N1Q8NGS0 311 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ORAOV1Q8WV07 137 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PIP5K1AQ99755 562 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SLC25A21Q9BQT8 299 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ADAMTS10Q9H324 1103 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ABHD16BQ9H3Z7 469 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 RNF181Q9P0P0 153 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PIM2Q9P1W9 311 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 KCND3Q9UK17 655 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 NFASCO94856 1347 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 TMEM129A0AVI4 362 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 TGFB1I1O43294 461 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ERI3O43414 337 aaKnown RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 MOSPD3O75425 235 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 OR7C1O76099 320 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 FGF5P12034 268 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 F3P13726 295 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 POU3F2P20265 443 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PTGER1P34995 402 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ELOCQ15369 112 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ABRAQ8N0Z2 381 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 FBXL6Q8N531 539 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 OR2T10Q8NGZ9 312 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 KCTD13Q8WZ19 329 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 DNAJC30Q96LL9 226 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 GPR82Q96P67 336 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CDCP1Q9H5V8 836 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 NMUR1Q9HB89 426 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 BEX4Q9NWD9 120 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SLC5A10A0PJK1 596 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 C21orf140B9A014 251 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 FAM155BO75949 473 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 GP1BAP07359 652 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 JUNBP17275 347 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SLC25A1P53007 311 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SPHARQ15513 63 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 HLA-DRB5Q30154 266 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CD276Q5ZPR3 534 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PSAPL1Q6NUJ1 521 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ARL14EPQ8N8R7 260 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 OR10G8Q8NGN5 311 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 OR5W2Q8NH69 310 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SEH1LQ96EE3 360 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 THSD1Q9NS62 852 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SLCO1C1Q9NYB5 712 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SLC25A15Q9Y619 301 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SMPD2O60906 423 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 NCR1O76036 304 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 DXOO77932 396 aaKnown RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CRYAAP02489 173 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PSG2P11465 335 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CD46P15529 392 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PCMT1P22061 227 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 CEACAM3P40198 252 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 GLIPR1P48060 266 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 NOGQ13253 232 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 BSXQ3C1V8 233 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 C5orf46Q6UWT4 87 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 GLDNQ6ZMI3 551 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF841Q6ZN19 808 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 SLCO4C1Q6ZQN7 724 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 H1FNTQ75WM6 255 aaPredicted RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 TCF24Q7RTU0 167 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 ARRDC1Q8N5I2 433 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 HSH2DQ96JZ2 352 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 MRPL16Q9NX20 251 aaKnown RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
PTPN13-202ENST00000411767 MLH3Q9UHC1 1453 aa4.21□□□□□ -1.74
PTPN13-202ENST00000411767 PQLC2LA1A4F0 135 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 LIMS3P0CW19 117 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 LIMS4P0CW20 117 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 EFNA1P20827 205 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 DRD5P21918 477 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SLC22A6Q4U2R8 563 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 RGS7BPQ6MZT1 257 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 NKAIN3Q8N8D7 197 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ZDHHC22Q8N966 263 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR9Q2Q8NGE9 314 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 OR5AK3PQ8NH89 298 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 PTX4Q96A99 478 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 ZNF668Q96K58 619 aaPredicted RBP4.2□□□□□ -1.74
PTPN13-202ENST00000411767 DEFB129Q9H1M3 183 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 NSG2Q9Y328 171 aa4.2□□□□□ -1.74
PTPN13-202ENST00000411767 SPATA31A6Q5VVP1 1343 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms