RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 S100A12P80511 92 aa12.77□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF227Q86WZ6 799 aa12.77□□□□□ -0.37
MINDY4-202ENST00000409881 DUSP19Q8WTR2 217 aa12.77□□□□□ -0.37
MINDY4-202ENST00000409881 TSNAXQ99598 290 aaKnown RBP12.77□□□□□ -0.37
MINDY4-202ENST00000409881 SLC19A3Q9BZV2 496 aa12.77□□□□□ -0.37
MINDY4-202ENST00000409881 SH2D2AQ9NP31 389 aa12.77□□□□□ -0.37
MINDY4-202ENST00000409881 DUX4Q9UBX2 424 aa12.77□□□□□ -0.37
MINDY4-202ENST00000409881 OR5V1Q9UGF6 321 aa12.77□□□□□ -0.37
MINDY4-202ENST00000409881 OR5H15A6NDH6 313 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 RIIAD1A6NNX1 92 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF264O43296 627 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 ADAM11O75078 769 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 ATG12O94817 140 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 P04436 131 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 RPA2P15927 270 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 PTGDSP41222 190 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF117Q03924 483 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 CBLN3Q6UW01 205 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 LDLRAD3Q86YD5 345 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
MINDY4-202ENST00000409881 OR4D10Q8NGI6 311 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 CMTM3Q96MX0 182 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 WDR13Q9H1Z4 485 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 PPP4R1LQ9P1A2 415 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 WIF1Q9Y5W5 379 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 CFAP47Q6ZTR5 3102 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 TMEM8BA6NDV4 472 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 ACOT7O00154 380 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 SLC25A12O75746 678 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 NEURL1O76050 574 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 APOC1P02654 83 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 TAS2R20P59543 309 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 SKP2Q13309 424 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 GUCA2BQ16661 112 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 PCGF3Q3KNV8 242 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.76□□□□□ -0.37
MINDY4-202ENST00000409881 C2CD4CQ8TF44 421 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 RNF138Q8WVD3 245 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 TMEM239Q8WW34 195 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 EXTL1Q92935 676 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 PTPRQQ9UMZ3 2332 aa12.76□□□□□ -0.37
MINDY4-202ENST00000409881 ANKRD61A6NGH8 418 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF879B4DU55 563 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 PSMD9O00233 223 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 ADAM10O14672 748 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 EIF4E2O60573 245 aaKnown RBP12.75□□□□□ -0.37
MINDY4-202ENST00000409881 PVALBP20472 110 aaPredicted RBP12.75□□□□□ -0.37
MINDY4-202ENST00000409881 CNR1P21554 472 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF136P52737 540 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 ACTC1P68032 377 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 ACTA1P68133 377 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 RBMS2Q15434 407 aaKnown RBP12.75□□□□□ -0.37
MINDY4-202ENST00000409881 TBR1Q16650 682 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 MISPQ8IVT2 679 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 OR4C16Q8NGL9 310 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 SNX33Q8WV41 574 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 JSRP1Q96MG2 331 aaPredicted RBP12.75□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF75AQ96N20 296 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 CHST6Q9GZX3 395 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 TMEM185BQ9H7F4 350 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF230Q9UIE0 474 aaPredicted RBP12.75□□□□□ -0.37
MINDY4-202ENST00000409881 LHX6Q9UPM6 363 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 LAMA5O15230 3695 aa12.75□□□□□ -0.37
MINDY4-202ENST00000409881 TRAV14DV4A0A0A6YYC5 116 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 A0A0G2JMM0 328 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 A0A1W2PPB8 328 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 A0A1W2PRS3 328 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 KIR3DP1A8MWS1 328 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 SMAD9O15198 467 aaKnown RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 SULT1B1O43704 296 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 RCBTB2O95199 551 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 UBBP0CG47 229 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 UBCP0CG48 685 aaKnown RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF3P17036 446 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 HTR2AP28223 471 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 LUMP51884 338 aaPredicted RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 POLR2GP62487 172 aaKnown RBP eCLIP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 RPS27AP62979 156 aaKnown RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 UBA52P62987 128 aaKnown RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 C17orf67Q0P5P2 114 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 PLA2G7Q13093 441 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 INPP5JQ15735 1006 aaPredicted RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 BEX5Q5H9J7 111 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 MOB3CQ70IA8 216 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF550Q7Z398 422 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 ZNF546Q86UE3 836 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 RANBP3LQ86VV4 465 aaPredicted RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 ANGPTL4Q9BY76 406 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 MFRPQ9BY79 579 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 HES7Q9BYE0 225 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 SDHAF3Q9NRP4 125 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 NUDT14O95848 222 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 MGMTP16455 207 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 MAPK3P27361 379 aaPredicted RBP12.74□□□□□ -0.37
MINDY4-202ENST00000409881 KCNJ3P48549 501 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 DNASE1L1P49184 302 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 C4orf46Q504U0 113 aa12.74□□□□□ -0.37
MINDY4-202ENST00000409881 HAS2Q92819 552 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms