RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 RAP2AP10114 183 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNF823P16415 610 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 PYCR1P32322 319 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 TRAP1Q12931 704 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 GK3PQ14409 553 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 CYB561A3Q8NBI2 242 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 PROKR2Q8NFJ6 384 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 OR8G5Q8NG78 346 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 CCDC124Q96CT7 223 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 CLPTM1LQ96KA5 538 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 ATF6BQ99941 703 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 GAL3ST1Q99999 423 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 TSSK6Q9BXA6 273 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 PNRC2Q9NPJ4 139 aaKnown RBP16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 TMEM106BQ9NUM4 274 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 BAIAP2Q9UQB8 552 aa16.58■□□□□ 0.24
TSPAN4-209ENST00000409543 DYSFO75923 2080 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 PLPP2O43688 288 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 OR2T2Q6IF00 324 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 SLC27A4Q6P1M0 643 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 FAHD2BQ6P2I3 314 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 OR5AS1Q8N127 324 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 RFLNBQ8N5W9 214 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNF283Q8N7M2 679 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 SLC37A3Q8NCC5 494 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 FAHD2AQ96GK7 314 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 MAP6Q96JE9 813 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNF582Q96NG8 517 aaPredicted RBP16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 THTPAQ9BU02 230 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 CHID1Q9BWS9 393 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 G6PC2Q9NQR9 355 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 FAM53CQ9NYF3 392 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 NPTNQ9Y639 398 aa16.57■□□□□ 0.24
TSPAN4-209ENST00000409543 ISPDA4D126 451 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 IQCF6A8MYZ5 107 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 F5H5K5 113 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 KRTAP24-1Q3LI83 254 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 CD300LDQ6UXZ3 194 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 TRPM8Q7Z2W7 1104 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 ADGRG5Q8IZF4 528 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 ATG16L2Q8NAA4 619 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 OR2T33Q8NG76 320 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 OR13G1Q8NGZ3 307 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 OR4Q3Q8NH05 313 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 ITLN1Q8WWA0 313 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 ZNRF4Q8WWF5 429 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 OR2V2Q96R30 315 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 RBM4Q9BWF3 364 aaKnown RBP16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 HCAR1Q9BXC0 346 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 DCAF16Q9NXF7 216 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 METRNQ9UJH8 293 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 PPP1R3CQ9UQK1 317 aa16.56■□□□□ 0.24
TSPAN4-209ENST00000409543 AQP12BA6NM10 295 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 SOX14O95416 240 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 PNPP00491 289 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 IGHV2-70P01814 119 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 SELEP16581 610 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 SLC25A1P53007 311 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 TPTEP56180 551 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 CRMP1Q14194 572 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 AQP12AQ8IXF9 295 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 OR10G2Q8NGC3 310 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 OR9Q1Q8NGQ5 310 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 SLC30A2Q9BRI3 323 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 NMNAT2Q9BZQ4 307 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 WDR76Q9H967 626 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 DDX28Q9NUL7 540 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 ARMC1Q9NVT9 282 aa16.55■□□□□ 0.24
TSPAN4-209ENST00000409543 A0A0G2JMP0 313 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 A0A0X1KG70 313 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 ARRDC5A6NEK1 342 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 TVP23AA6NH52 213 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 IFNL4K9M1U5 179 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 CST1P01037 141 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 LCATP04180 440 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 SBK2P0C263 348 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 HOXB6P17509 224 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 MALLQ13021 153 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 HNRNPA0Q13151 305 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 LIPNQ5VXI9 398 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 SHQ1Q6PI26 577 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 NAA40Q86UY6 237 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 TEX29Q8N6K0 151 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 OR4M2Q8NGB6 313 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 OR51L1Q8NGJ5 315 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 OR10S1Q8NGN2 331 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 BCAS4Q8TDM0 211 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 GIPC3Q8TF64 312 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 SPTSSAQ969W0 71 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 NIPSNAP1Q9BPW8 284 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 METTL17Q9H7H0 456 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 GCM1Q9NP62 436 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 UBAP1Q9NZ09 502 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 COMMD3-BMI1R4GMX3 469 aa16.54■□□□□ 0.24
TSPAN4-209ENST00000409543 A0A1B0GWJ7 208 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 DHRS12A0PJE2 317 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 J3QLI3 93 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 TCF21O43680 179 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 IFNGP01579 166 aa16.53■□□□□ 0.24
TSPAN4-209ENST00000409543 SPI1P17947 270 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms