RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ZNF561Q8N587 486 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 ZSCAN4Q8NAM6 433 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 OR10G6Q8NH81 332 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 FLVCR1-AS1Q8TAF5 88 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 FAM174AQ8TBP5 190 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 HOXB13Q92826 284 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 SLC22A18Q96BI1 424 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 CHRDQ9H2X0 955 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 CGGBP1Q9UFW8 167 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 PCDHGA1Q9Y5H4 931 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 IGKV1D-42A0A075B6H8 117 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 NUDT21O43809 227 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 CTSVO60911 334 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 GUSBP08236 651 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 FABP9Q0Z7S8 132 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 MEP1BQ16820 701 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 MESTQ5EB52 335 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 EMC4Q5J8M3 183 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 PRSS41Q7RTY9 318 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 TRAPPC6BQ86SZ2 158 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 ABCA7Q8IZY2 2146 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 SHISA5Q8N114 240 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 OTOSQ8NHW6 89 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 SLC37A2Q8TED4 501 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 MRGPRFQ96AM1 343 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 RRNAD1Q96FB5 475 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 ZC3H10Q96K80 434 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 SMIM8Q96KF7 97 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 CLCC1Q96S66 551 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 AMELYQ99218 206 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 LMF2Q9BU23 707 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 TAS2R4Q9NYW5 299 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 METTL1Q9UBP6 276 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 GHRLQ9UBU3 117 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 SLC22A13Q9Y226 551 aa13.85□□□□□ -0.19
LIMS2-205ENST00000409455 MRPS33Q9Y291 106 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 RPH3AQ9Y2J0 694 aaPredicted RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 MRPS18BQ9Y676 258 aaKnown RBP13.85□□□□□ -0.19
LIMS2-205ENST00000409455 SDK1Q7Z5N4 2213 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 CYR61O00622 381 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 BLKP51451 505 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 PGDP52209 483 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 KLHL26Q53HC5 615 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 EIF5AL1Q6IS14 154 aaKnown RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 FJX1Q86VR8 437 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 JAGN1Q8N5M9 183 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 LRRC75AQ8NAA5 344 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 ACBD4Q8NC06 268 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 ADAD2Q8NCV1 583 aaKnown RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 OR5T3Q8NGG3 340 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 ADAMTS17Q8TE56 1095 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 HIST1H2BAQ96A08 127 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 CLDN23Q96B33 292 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF285Q96NJ3 590 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 MOGAT1Q96PD6 335 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 NUDT9Q9BW91 350 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 BCL2L14Q9BZR8 327 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 TDRD6O60522 2096 aaKnown RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 DCDC2BA2VCK2 349 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 DBX1A6NMT0 343 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 GPANK1O95872 356 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 TXNDC12O95881 172 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 HLA-DQA2P01906 255 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF14P17017 642 aaPredicted RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 CD38P28907 300 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 EIF2B1Q14232 305 aaKnown RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 SLC17A1Q14916 467 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 KIR2DS3Q14952 304 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 EEF1A1P5Q5VTE0 462 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 SLC29A4Q7RTT9 530 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 ZNF761Q86XN6 746 aaPredicted RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 CADM4Q8NFZ8 388 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 SLC39A7Q92504 469 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 NKD1Q969G9 470 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 OR8B4Q96RC9 309 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 SULT4A1Q9BR01 284 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 G6PC3Q9BUM1 346 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 RNF126Q9BV68 326 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 LRRC61Q9BV99 259 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 OR2S2Q9NQN1 319 aa13.84□□□□□ -0.19
LIMS2-205ENST00000409455 PRMT8Q9NR22 394 aaPredicted RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 MRPS2Q9Y399 296 aaKnown RBP13.84□□□□□ -0.19
LIMS2-205ENST00000409455 LRP4O75096 1905 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 LAMA1P25391 3075 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 METTL21EPA6NDL7 271 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 MFNGO00587 321 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 EFSO43281 561 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 MT-ND4LP03901 98 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 IFNA6P05013 189 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 TAS2R31P59538 309 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 SLC35D2Q76EJ3 337 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 NUBPLQ8TB37 319 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 ASB5Q8WWX0 329 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 RERGQ96A58 199 aaPredicted RBP13.83□□□□□ -0.2
LIMS2-205ENST00000409455 FBXO17Q96EF6 278 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 TSPAN32Q96QS1 320 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 TWSG1Q9GZX9 223 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 LAT2Q9GZY6 243 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 MUC3AQ02505 3323 aa13.83□□□□□ -0.2
LIMS2-205ENST00000409455 KIR2DS5A0A0G2JLQ3 304 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms