RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 UPRTQ96BW1 309 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 SPACA9Q96E40 222 aaPredicted RBP11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 SCMH1Q96GD3 660 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 TP63Q9H3D4 680 aaPredicted RBP11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 EMC7Q9NPA0 242 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 MED11Q9P086 117 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 HHLA2Q9UM44 414 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 CLEC4AQ9UMR7 237 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 KLHDC2Q9Y2U9 406 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 R4GMQ9 66 aa11.46□□□□□ -0.57
SMARCB1-203ENST00000407082 A0A0A6YYH2 397 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 A6NJ64 397 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 LIPT2A6NK58 231 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 SULT1C2O00338 296 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 XRCC3O43542 346 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 RBBP9O75884 186 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 WDPCPO95876 746 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 F10P00742 488 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 ISG15P05161 165 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 CD3GP09693 182 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 UBCP0CG48 685 aaKnown RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 FSTP19883 344 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 PTGS2P35354 604 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 DNASE1L1P49184 302 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 SSR4P51571 173 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 DGCR2P98153 550 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 KLF9Q13886 244 aaPredicted RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 PCK2Q16822 640 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 WDR38Q5JTN6 314 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 IGFL2Q6UWQ7 119 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 RHOUQ7L0Q8 258 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 MRGPRGQ86SM5 289 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 GLB1L2Q8IW92 636 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 TMEM156Q8N614 296 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 HAS2Q92819 552 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF524Q96C55 264 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 RASL10BQ96S79 203 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 KCNK17Q96T54 332 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 UTP23Q9BRU9 249 aaKnown RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 ABHD6Q9BV23 337 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 OR11A1Q9GZK7 315 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 TSPAN10Q9H1Z9 355 aaPredicted RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 GPN1Q9HCN4 374 aaPredicted RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 MCUBQ9NWR8 336 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 ANKRD10Q9NXR5 420 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 PLA2G3Q9NZ20 509 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 OR5V1Q9UGF6 321 aa11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 COA3Q9Y2R0 106 aaPredicted RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 KLF2Q9Y5W3 355 aaPredicted RBP11.45□□□□□ -0.58
SMARCB1-203ENST00000407082 CPAMD8Q8IZJ3 1885 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 TACC2O95359 2948 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 LOC102725191A0A1B0GVB3 256 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 SLC17A2O00624 439 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 LANCL1O43813 399 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF354AO60765 605 aaPredicted RBP11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 SCGNO76038 276 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 CSF1P09603 554 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 H2BFMP0C1H6 154 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 IFNGR1P15260 489 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 CTLA4P16410 223 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 CD96P40200 585 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 KIR3DL2P43630 455 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 CYB561P49447 251 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 GZMKP49863 264 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 SLC35A1P78382 337 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 ARG2P78540 354 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 OC90Q02509 493 aaPredicted RBP11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 FAPQ12884 760 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 FOXF1Q12946 379 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 TNK1Q13470 666 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 ZNF239Q16600 458 aaKnown RBP11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 PLPPR5Q32ZL2 321 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 METTL11BQ5VVY1 283 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 OLFML2AQ68BL7 652 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 FAM180AQ6UWF9 173 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 PRSS35Q8N3Z0 413 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 NKAIN3Q8N8D7 197 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 ZFAND1Q8TCF1 268 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 ITLN2Q8WWU7 325 aaPredicted RBP11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 MED30Q96HR3 178 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 DMRTB1Q96MA1 342 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 OXGR1Q96P68 337 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 OR51J1Q9H342 316 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 MOB1AQ9H8S9 216 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 MRPL22Q9NWU5 206 aaKnown RBP11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 GTF2A1LQ9UNN4 478 aa11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 RBMX2Q9Y388 322 aaKnown RBP11.44□□□□□ -0.58
SMARCB1-203ENST00000407082 A0A0B4J293 547 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 TRGV8A0A0C4DH27 118 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 LOC100289279A0A1B0GTE1 492 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 ANKRD20A5PA0PJZ0 165 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 PRR32B1ATL7 298 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 CDK2AP1O14519 115 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 ADAM10O14672 748 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 GLSO94925 669 aaPredicted RBP11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 IGHG1P01857 330 aa11.43□□□□□ -0.58
SMARCB1-203ENST00000407082 MAS1P04201 325 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms