RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 RIDAP52758 137 aaKnown RBP28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 TPTEP56180 551 aa28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 OR12D2P58182 307 aa28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 ADAM5Q6NVV9 412 aa28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 SLC22A25Q6T423 547 aa28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 ZNF283Q8N7M2 679 aa28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 YIPF7Q8N8F6 280 aa28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 OR51B6Q9H340 312 aa28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 CHCHD3Q9NX63 227 aaKnown RBP28.78■■■□□ 2.2
CSNK1E-204ENST00000403904 SLC6A9P48067 706 aa28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 CX3CR1P49238 355 aa28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 ACTA2P62736 377 aa28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 ACTG2P63267 376 aa28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 C4orf36Q96KX1 117 aa28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 C4orf45Q96LM5 186 aa28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 CCDC90BQ9GZT6 254 aa28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 ISG20L2Q9H9L3 353 aaKnown RBP28.77■■■□□ 2.2
CSNK1E-204ENST00000403904 HRNRQ86YZ3 2850 aaPredicted RBP28.76■■■□□ 2.2
CSNK1E-204ENST00000403904 A6NNC1 897 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 J3QLW9 94 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 SULT1C4O75897 302 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 ABHD16AO95870 558 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 ZNF19P17023 458 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 CHN2P52757 468 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 ZNF101Q8IZC7 436 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 MRPL48Q96GC5 212 aaKnown RBP28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 SIGLEC11Q96RL6 698 aa28.76■■■□□ 2.19
CSNK1E-204ENST00000403904 RPP14O95059 124 aaKnown RBP28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 HTR1AP08908 422 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 FAM157BP0CG42 384 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 SLC2A1P11166 492 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 GABARAPL2P60520 117 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 OR2G6Q5TZ20 316 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 LIPNQ5VXI9 398 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 DCLRE1CQ96SD1 692 aaKnown RBP28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 NIPAL2Q9H841 368 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 BRD7Q9NPI1 651 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 ACOXLQ9NUZ1 547 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 N6AMT1Q9Y5N5 214 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 PLAUP00749 431 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 MT-ND2P03891 347 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 DRAM2Q6UX65 266 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 FAM220AQ7Z4H9 259 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 DOK1Q99704 481 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 EIF3KQ9UBQ5 218 aaKnown RBP28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 RNF115Q9Y4L5 304 aa28.75■■■□□ 2.19
CSNK1E-204ENST00000403904 NGFP01138 241 aa28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 PRSS48Q7RTY5 328 aa28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 KCTD20Q7Z5Y7 419 aa28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 KLHL36Q8N4N3 616 aa28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 KBTBD8Q8NFY9 601 aa28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 MYCBPQ99417 103 aaPredicted RBP28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 CDCA4Q9BXL8 241 aa28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 CAB39Q9Y376 341 aaPredicted RBP28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 ROS1P08922 2347 aa28.74■■■□□ 2.19
CSNK1E-204ENST00000403904 SHISA9B4DS77 424 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 TACSTD2P09758 323 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 ANOS1P23352 680 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 DCTDP32321 178 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 CDH15P55291 814 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 UCP2P55851 309 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 ZNF121P58317 390 aaPredicted RBP28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 ARL9Q6T311 187 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 SYS1Q8N2H4 156 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 TMEM204Q9BSN7 226 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 PTPN13Q12923 2485 aa28.73■■■□□ 2.19
CSNK1E-204ENST00000403904 TMEM269A0A1B0GVZ9 245 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 APOC1P02654 83 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 LCATP04180 440 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 ANXA2P07355 339 aaKnown RBP28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 NR4A1P22736 598 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 PCSK6P29122 969 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 PSMA6P60900 246 aaKnown RBP28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 TMPRSS11AQ6ZMR5 421 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 ABHD4Q8TB40 342 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 SPRYD4Q8WW59 207 aaPredicted RBP28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 C1QTNF5Q9BXJ0 243 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 POU2F3Q9UKI9 436 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 ERGIC3Q9Y282 383 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 PLCE1Q9P212 2302 aa28.72■■■□□ 2.19
CSNK1E-204ENST00000403904 ICMTO60725 284 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 SMPD2O60906 423 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 PNPP00491 289 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 PSMB10P40306 273 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 RNLSQ5VYX0 342 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 RFPL4BQ6ZWI9 263 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 NEUROG1Q92886 237 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 PELI1Q96FA3 418 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 TBCCD1Q9NVR7 557 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 SPEF1Q9Y4P9 236 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 ATP23Q9Y6H3 246 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 LRBAP50851 2863 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 MYL12BO14950 172 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 TNFAIP8O95379 198 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 MFGE8Q08431 387 aaPredicted RBP28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 SNTB2Q13425 540 aaKnown RBP28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 IRF3Q14653 427 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 ZNF829Q3KNS6 432 aaPredicted RBP28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 KCTD21Q4G0X4 260 aa28.71■■■□□ 2.19
CSNK1E-204ENST00000403904 HIST2H2BCQ6DN03 193 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms